Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 MIR3146-201ENST00000580367 79 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AL590240.4-201ENST00000616908 390 ntBASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.49□□□□□ -2.33
PHRF1Q9P1Y6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 RNA5SP327-201ENST00000362494 101 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 RNU5A-8P-201ENST00000364102 114 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 RNU1-96P-201ENST00000364163 162 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-946P-201ENST00000383878 107 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 MIR608-201ENST00000384820 100 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 MIR19B1-201ENST00000384829 87 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 Y_RNA.578-201ENST00000390903 88 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 MRPL35P1-201ENST00000404272 572 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 RPL23AP30-201ENST00000432419 501 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 GTF2IP13-201ENST00000438487 386 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 MTND1P30-201ENST00000441241 901 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 RPS27AP8-201ENST00000452665 445 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 SNORD124-201ENST00000459577 104 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 AL133373.1-201ENST00000497098 94 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 SCARNA16.2-201ENST00000516520 172 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 SNORA43.2-201ENST00000516652 128 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 AC136628.3-201ENST00000521868 290 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 AC115990.1-201ENST00000526957 301 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 AL512310.8-201ENST00000550183 120 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 AL022345.2-201ENST00000606307 135 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 SCARNA4-202ENST00000625402 129 ntBASIC0.48□□□□□ -2.33
PHRF1Q9P1Y6 U3.8-201ENST00000363675 217 ntBASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 VPS26BP1-201ENST00000417155 755 ntBASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 MTCO3P9-201ENST00000506989 781 ntBASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 MTCO3P28-201ENST00000513351 515 ntBASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 AC078795.2-201ENST00000602835 1252 ntBASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 AL592221.1-201ENST00000605266 382 ntBASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 AL512427.1-201ENST00000618593 349 ntBASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 AC126544.2-201ENST00000625174 749 ntBASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 MIR338-201ENST00000636369 67 ntBASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 AL159152.1-201ENST00000635019 2587 ntBASIC0.47□□□□□ -2.33
PHRF1Q9P1Y6 RNU6-212P-201ENST00000362642 104 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-527P-201ENST00000363425 104 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-723P-201ENST00000383973 107 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 MIR1284-201ENST00000408337 120 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 ARL5AP1-201ENST00000418991 388 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AC099677.2-201ENST00000436385 175 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AC007969.2-201ENST00000441891 191 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 HSPE1P13-201ENST00000451143 297 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AL122001.1-201ENST00000457027 370 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AC114982.1-201ENST00000469402 321 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AC091435.1-201ENST00000505442 584 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AC010376.1-201ENST00000522101 334 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 ADI1P3-201ENST00000549509 470 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 MIR3664-201ENST00000579074 99 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AC068620.3-201ENST00000602749 560 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AC024060.1-201ENST00000607052 494 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AC072039.2-201ENST00000608883 439 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AC006461.1-201ENST00000412637 326 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 PIGFP2-201ENST00000421400 651 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AC137499.1-201ENST00000427602 88 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 snoU13.27-201ENST00000459278 104 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 RN7SKP88-201ENST00000516847 250 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 RNU6-201P-201ENST00000517100 61 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 SNORA70.22-201ENST00000517160 124 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 SUMO2P18-201ENST00000518873 252 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 MIR5697-201ENST00000578045 78 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 MIR544B-201ENST00000582372 78 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 MIR3136-201ENST00000583498 78 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 BX284668.6-201ENST00000606899 438 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AL365434.2-201ENST00000607979 234 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AC245297.2-201ENST00000610119 565 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 7SK.8-201ENST00000612110 250 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 7SK.11-201ENST00000615477 250 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 RMST_7.1-201ENST00000621935 268 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 7SK.13-201ENST00000622040 250 ntBASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.46□□□□□ -2.34
PHRF1Q9P1Y6 AL391516.1-201ENST00000554380 2449 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 SNORD56.1-201ENST00000362913 68 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 SNORA63D-201ENST00000364359 132 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 SNORD116-12-201ENST00000384468 92 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 MIR10B-201ENST00000385011 110 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 MIR1265-201ENST00000408444 86 ntBASIC0.45□□□□□ -2.34
PHRF1Q9P1Y6 RNA5SP25-201ENST00000410815 110 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms