Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.17□□□□□ -2.06
NDE1Q9NXR1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.17□□□□□ -2.06
NDE1Q9NXR1 AL117336.2-201ENST00000602435 335 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 AC019193.3-201ENST00000609144 554 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 AL133215.3-201ENST00000609801 448 ntBASIC2.17□□□□□ -2.06
NDE1Q9NXR1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
NDE1Q9NXR1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NDE1Q9NXR1 MIR449A-201ENST00000362113 91 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 SNORA3A-201ENST00000364113 130 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 U3.13-201ENST00000364804 214 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 RNA5SP126-201ENST00000365092 109 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 RNU6-933P-201ENST00000384424 107 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 RNU6-601P-201ENST00000384540 107 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 MIR518C-201ENST00000384822 101 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
NDE1Q9NXR1 SNORA48.3-201ENST00000391081 134 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
NDE1Q9NXR1 RNU6-370P-201ENST00000411008 104 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 RNU6-1245P-201ENST00000411130 106 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.16□□□□□ -2.06
NDE1Q9NXR1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.16□□□□□ -2.06
NDE1Q9NXR1 ARL5AP4-201ENST00000430731 512 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 RNU6-559P-201ENST00000516151 98 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 AC023824.2-201ENST00000566185 400 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 MIR4795-201ENST00000584182 89 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 BNIP3P16-201ENST00000589779 534 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 AC124303.1-201ENST00000605703 360 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 SNORD14A-201ENST00000606526 91 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.16□□□□□ -2.06
NDE1Q9NXR1 MIR6715A-201ENST00000615929 79 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
NDE1Q9NXR1 MIR203B-201ENST00000636080 86 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 MTND4LP32-201ENST00000636111 270 ntBASIC2.16□□□□□ -2.06
NDE1Q9NXR1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
NDE1Q9NXR1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.16□□□□□ -2.06
NDE1Q9NXR1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
NDE1Q9NXR1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
NDE1Q9NXR1 AL109809.4-201ENST00000603520 2185 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.15□□□□□ -2.07
NDE1Q9NXR1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
NDE1Q9NXR1 RNU6-212P-201ENST00000362642 104 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 HMGN2P38-201ENST00000423806 265 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AL133396.1-201ENST00000432048 687 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.15□□□□□ -2.07
NDE1Q9NXR1 IPO7P1-201ENST00000442031 636 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 RPL23AP7-203ENST00000449021 469 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AL441985.1-201ENST00000457727 251 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.635-201ENST00000459041 101 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 U8.21-201ENST00000459536 136 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 RPS29P27-201ENST00000463711 170 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 RPL36AP48-201ENST00000485521 314 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC116337.1-201ENST00000509680 687 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC008549.1-201ENST00000512900 643 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC026782.1-201ENST00000512952 449 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 RNU5B-3P-201ENST00000516601 115 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 RNU6-1016P-201ENST00000516689 94 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AP005902.1-201ENST00000521358 186 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC021269.2-201ENST00000532318 330 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 FRG2DP-202ENST00000566967 323 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.15□□□□□ -2.07
NDE1Q9NXR1 CPDP1-201ENST00000579660 283 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.15□□□□□ -2.07
NDE1Q9NXR1 MIR4765-201ENST00000585007 77 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 C8orf59P2-201ENST00000603441 271 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AP001836.1-201ENST00000604675 523 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC113139.1-201ENST00000605049 239 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC013412.1-201ENST00000610687 192 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC024581.2-201ENST00000619986 252 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AC009831.4-201ENST00000620744 325 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 AL359697.1-201ENST00000624879 587 ntBASIC2.15□□□□□ -2.07
NDE1Q9NXR1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NDE1Q9NXR1 RNU6-529P-201ENST00000363383 104 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
NDE1Q9NXR1 RNU6-842P-201ENST00000384269 107 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 RNU6-43P-201ENST00000384302 107 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 MIR218-1-201ENST00000384999 110 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.594-201ENST00000410373 140 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.14□□□□□ -2.07
NDE1Q9NXR1 MTND3P23-201ENST00000431980 347 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.14□□□□□ -2.07
NDE1Q9NXR1 RPL39P29-201ENST00000447779 157 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 AL021397.1-201ENST00000451806 248 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.14□□□□□ -2.07
NDE1Q9NXR1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.14□□□□□ -2.07
NDE1Q9NXR1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.14□□□□□ -2.07
NDE1Q9NXR1 FO393415.2-201ENST00000480085 343 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 RPL7P42-201ENST00000481005 679 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 RPS27P21-201ENST00000486977 252 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 FGF7P4-201ENST00000509595 295 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 SMURF2P1-201ENST00000514992 481 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.670-201ENST00000516255 105 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 RNA5SP364-201ENST00000516938 78 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 APOOP3-201ENST00000536787 586 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 IMMP1LP2-201ENST00000552954 492 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 MIR4672-201ENST00000583126 81 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms