Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL049781.1-201ENST00000623195 3585 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 RNU6-222P-201ENST00000362438 107 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 SNORD115-8-201ENST00000363856 82 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 SNORD115-38-201ENST00000365037 82 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 RNU6-823P-201ENST00000391042 103 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 RPL21P3-201ENST00000395517 478 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 MIR208B-201ENST00000401172 77 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 MTCO3P8-201ENST00000453691 755 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AC146507.2-201ENST00000460608 476 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AP000870.1-201ENST00000472927 406 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 RNA5SP54-201ENST00000516951 92 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AC027288.2-201ENST00000553028 243 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AC113195.1-201ENST00000579952 141 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 RPS29P30-201ENST00000600975 111 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AC124312.5-201ENST00000604451 268 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AL162713.1-201ENST00000604480 262 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 AC005520.5-201ENST00000613926 164 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 ZNF72P-201ENST00000425869 1908 ntBASIC3.19□□□□□ -1.9
CCM2LQ9NUG4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 RNU4-50P-201ENST00000364361 141 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 SNORA63.7-201ENST00000365579 123 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 Y_RNA.380-201ENST00000365663 111 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 RPL21P75-201ENST00000396599 483 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 RPL21P28-201ENST00000401418 483 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 AL590556.1-201ENST00000423231 483 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 MICF-203ENST00000432679 129 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 AP000705.1-201ENST00000454567 350 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 RPS3P1-201ENST00000456781 192 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 RPL21P39-201ENST00000463605 483 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 HMGN1P10-201ENST00000474557 553 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 UBE2DNL-203ENST00000474922 222 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 AC087190.1-201ENST00000484462 480 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 AC107032.1-201ENST00000485945 480 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 AC132942.1-201ENST00000486753 483 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 AC093591.1-201ENST00000491435 481 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 RPL21P16-201ENST00000495531 483 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 MIR8057-201ENST00000620957 69 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
CCM2LQ9NUG4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 Y_RNA.27-201ENST00000362540 103 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 RNU5F-3P-201ENST00000363767 117 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 SNORA68.1-201ENST00000364537 132 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 RNU6-450P-201ENST00000364654 107 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 SNORA51.11-201ENST00000384442 131 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 SNORA48.5-201ENST00000391143 135 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 AC005326.1-201ENST00000429197 123 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 AC009969.1-201ENST00000438726 172 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 AC008155.2-201ENST00000464337 397 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 AL442163.3-201ENST00000554110 156 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 AL356575.1-201ENST00000603008 283 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 AL390123.1-201ENST00000603216 237 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 AL355297.3-201ENST00000604082 446 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 U4.6-201ENST00000621618 127 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 MIR7515-201ENST00000637837 67 ntBASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCM2LQ9NUG4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 AC092435.3-201ENST00000565538 3654 ntBASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 SNORD9-201ENST00000362566 104 ntBASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 RNU1-33P-201ENST00000364249 162 ntBASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 Y_RNA.557-201ENST00000384680 107 ntBASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 U3.19-201ENST00000390893 196 ntBASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 MIR1289-1-201ENST00000408836 144 ntBASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 RNA5SP201-201ENST00000410316 124 ntBASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 DBIP2-201ENST00000419076 262 ntBASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.16□□□□□ -1.9
CCM2LQ9NUG4 RPL23AP70-201ENST00000483361 460 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms