Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3□□□□□ -1.93
VPS45Q9NRW7 RNA5SP76-201ENST00000516277 87 ntBASIC3□□□□□ -1.93
VPS45Q9NRW7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3□□□□□ -1.93
VPS45Q9NRW7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3□□□□□ -1.93
VPS45Q9NRW7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3□□□□□ -1.93
VPS45Q9NRW7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3□□□□□ -1.93
VPS45Q9NRW7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS45Q9NRW7 Y_RNA.5-201ENST00000362334 102 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 SNORD56.1-201ENST00000362913 68 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 SNORA9.2-201ENST00000365361 133 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 SNORA26.7-201ENST00000391288 122 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 BTF3L4P2-201ENST00000392798 346 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS45Q9NRW7 SNORD88.1-201ENST00000408684 91 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AP000275.1-201ENST00000411943 390 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AC243428.1-201ENST00000421099 264 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.99□□□□□ -1.93
VPS45Q9NRW7 FO393415.2-201ENST00000480085 343 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AC022447.4-201ENST00000504053 364 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS45Q9NRW7 HSPE1P20-201ENST00000538133 289 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AC091544.4-201ENST00000555268 342 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS45Q9NRW7 RPS15AP11-201ENST00000594193 385 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AC078899.3-201ENST00000599065 212 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AP001836.1-201ENST00000604675 523 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AC107871.2-201ENST00000612894 502 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AC097372.5-201ENST00000623665 376 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AC241585.2-209ENST00000638217 143 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS45Q9NRW7 AC080128.1-201ENST00000474389 1917 ntBASIC2.99□□□□□ -1.93
VPS45Q9NRW7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS45Q9NRW7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
VPS45Q9NRW7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS45Q9NRW7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS45Q9NRW7 MTND5P9-201ENST00000503854 1755 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 Y_RNA.28-201ENST00000362554 111 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 Y_RNA.31-201ENST00000362574 102 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 Y_RNA.252-201ENST00000364556 101 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 Y_RNA.422-201ENST00000384054 114 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 RNU6-622P-201ENST00000384272 103 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 AC097463.2-201ENST00000421074 142 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 PMCHL1-202ENST00000423102 261 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 AC018865.2-201ENST00000423631 129 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 AC243964.1-201ENST00000441814 261 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS45Q9NRW7 RPL39P40-201ENST00000445481 146 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 AL035666.1-201ENST00000446195 348 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 AP004217.1-201ENST00000480579 346 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS45Q9NRW7 RNU6-988P-201ENST00000519081 107 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS45Q9NRW7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS45Q9NRW7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS45Q9NRW7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS45Q9NRW7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS45Q9NRW7 AC096644.4-201ENST00000563417 2912 ntBASIC2.98□□□□□ -1.93
VPS45Q9NRW7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS45Q9NRW7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VPS45Q9NRW7 Y_RNA.162-201ENST00000363683 102 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 Y_RNA.216-201ENST00000364205 93 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 RNU6-784P-201ENST00000384330 106 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 AC087499.2-201ENST00000432861 149 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.97□□□□□ -1.93
VPS45Q9NRW7 AL445687.1-201ENST00000439946 251 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 AL513124.1-201ENST00000450410 614 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS45Q9NRW7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.97□□□□□ -1.93
VPS45Q9NRW7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.97□□□□□ -1.93
VPS45Q9NRW7 RPL23AP70-201ENST00000483361 460 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 RPL36AP48-201ENST00000485521 314 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 RPL17P19-201ENST00000489069 552 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 RNU6-237P-201ENST00000515985 71 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 RNU6-699P-201ENST00000517081 110 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 SNORA31.23-201ENST00000517219 133 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 CBX3P8-201ENST00000532412 525 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 AC027176.1-201ENST00000560204 514 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 SUB1P3-201ENST00000564581 315 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 MIR5696-201ENST00000578474 85 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 AC090897.2-201ENST00000581715 130 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VPS45Q9NRW7 AC069294.1-201ENST00000608397 350 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 MIR6733-201ENST00000635723 61 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VPS45Q9NRW7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS45Q9NRW7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS45Q9NRW7 AC135776.4-201ENST00000624300 1904 ntBASIC2.97□□□□□ -1.93
VPS45Q9NRW7 ZNF299P-201ENST00000406845 1804 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 RBBP8P1-201ENST00000449447 1844 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
VPS45Q9NRW7 Y_RNA.48-201ENST00000362710 103 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 SNORD50.1-201ENST00000362987 71 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 SNORD114-19-201ENST00000363072 75 ntBASIC2.96□□□□□ -1.94
VPS45Q9NRW7 SNORA33.2-201ENST00000365413 134 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms