Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC106858.1-201ENST00000637497 429 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AC010615.1-201ENST00000594254 1764 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-78P-201ENST00000362897 107 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 RNU1-96P-201ENST00000364163 162 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-1235P-201ENST00000384559 107 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-910P-201ENST00000390844 107 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AL606490.4-201ENST00000423117 127 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AL669831.1-202ENST00000428504 417 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-498P-201ENST00000459468 107 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 TRBVA-201ENST00000498804 316 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 MIR4711-201ENST00000578274 70 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AC068790.6-201ENST00000602558 258 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AC012507.3-201ENST00000603556 477 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AP002782.1-201ENST00000623107 614 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 SNORD98-201ENST00000636377 67 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 AC068205.3-201ENST00000636385 468 ntBASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-1179P-201ENST00000384667 107 ntBASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 MRPL35P1-201ENST00000404272 572 ntBASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 MIR1197-201ENST00000408818 88 ntBASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 AC243964.1-201ENST00000441814 261 ntBASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 RPS27AP8-201ENST00000452665 445 ntBASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 AC067942.3-201ENST00000512025 362 ntBASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 CENPUP1-201ENST00000526649 1202 ntBASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 AC011979.2-201ENST00000527568 352 ntBASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 AC023050.2-201ENST00000544968 387 ntBASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 AC008147.4-201ENST00000617570 1204 ntBASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 AC026585.1-201ENST00000619582 524 ntBASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 AC126544.2-201ENST00000625174 749 ntBASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
KIAA1549Q9HCM3 AL445523.1-201ENST00000451184 1362 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-511P-201ENST00000363496 107 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 Y_RNA.465-201ENST00000384293 102 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 AL356776.1-201ENST00000406574 447 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 AC007969.2-201ENST00000441891 191 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 PRPS1P1-201ENST00000445305 876 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 OR2AQ1P-201ENST00000451972 200 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 AL122001.1-201ENST00000457027 370 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 RPS23P5-201ENST00000495419 428 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 PSMC1P5-201ENST00000512850 177 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 RNA5SP503-201ENST00000517047 117 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-165P-201ENST00000517170 99 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 SUMO2P16-201ENST00000519475 264 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 OR4G3P-201ENST00000633500 913 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 Y_RNA.110-201ENST00000363220 99 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 SNORA63D-201ENST00000364359 132 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-413P-201ENST00000384115 107 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-296P-201ENST00000384608 107 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 MIR216A-201ENST00000385063 110 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 RAP1BP3-201ENST00000407180 549 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 AC123900.1-201ENST00000420390 96 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 AL117351.1-201ENST00000438864 766 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 TMF1P1-201ENST00000576058 373 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 AC105129.3-201ENST00000605455 485 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 AC108747.1-201ENST00000609508 535 ntBASIC0.48□□□□□ -2.33
KIAA1549Q9HCM3 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-960P-201ENST00000364056 120 ntBASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 AL117342.1-201ENST00000404861 406 ntBASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 RNU2-64P-201ENST00000411315 191 ntBASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 TXNL1P1-201ENST00000429528 554 ntBASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 RNU6-1146P-201ENST00000516282 102 ntBASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 AC013828.2-201ENST00000532487 235 ntBASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 AC087883.1-201ENST00000551882 391 ntBASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 AC104073.3-201ENST00000610942 955 ntBASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 AC063943.3-201ENST00000615562 356 ntBASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 AC243829.3-201ENST00000622177 108 ntBASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
KIAA1549Q9HCM3 RNA5SP327-201ENST00000362494 101 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 RNU4-15P-201ENST00000362613 141 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-16P-201ENST00000384385 107 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 RPS20P2-201ENST00000402520 389 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 AL136310.1-201ENST00000404926 654 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 RNA5SP511-201ENST00000410487 115 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 RPL22P18-201ENST00000417197 377 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 RAB28P5-201ENST00000427490 651 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 MTCO3P29-201ENST00000432119 779 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 AC244670.1-201ENST00000436879 112 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms