Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 RPS29P21-201ENST00000496272 170 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 RNU6-1088P-201ENST00000516850 104 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 AP005639.2-201ENST00000527592 928 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 AL355297.2-201ENST00000604792 129 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 AL034555.1-201ENST00000604816 211 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 U4.3-201ENST00000621047 82 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 SNORD98-201ENST00000636377 67 ntBASIC2.49□□□□□ -2.01
POLR1BQ9H9Y6 AP006437.1-201ENST00000641440 3685 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 RNU6-845P-201ENST00000362578 103 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 MIR27B-201ENST00000385129 97 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 MIR561-201ENST00000385216 97 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC138393.2-201ENST00000414742 246 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AL590135.1-201ENST00000422215 156 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC019205.3-201ENST00000424573 156 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 MTND3P9-201ENST00000429526 346 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC016700.2-201ENST00000446011 156 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 MTND3P10-201ENST00000450967 341 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AL353752.1-201ENST00000454946 260 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 SNRPGP7-201ENST00000469016 106 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC015911.1-201ENST00000495111 156 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC116353.2-201ENST00000505332 712 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 RPL39P5-202ENST00000512505 151 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 SNORA20.3-201ENST00000516880 132 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC243972.3-201ENST00000539655 198 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC018630.3-201ENST00000542637 96 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC124303.1-201ENST00000605703 360 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 AC022306.2-201ENST00000617563 647 ntBASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.48□□□□□ -2.01
POLR1BQ9H9Y6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 AC069528.2-201ENST00000624849 1991 ntBASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 RNU6-790P-201ENST00000384479 105 ntBASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 NCOR1P3-201ENST00000420479 303 ntBASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 AL590632.1-201ENST00000424289 371 ntBASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 GPM6BP3-201ENST00000442797 145 ntBASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 PPP1R2P5-201ENST00000457256 603 ntBASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 IGKV3-31-201ENST00000523109 329 ntBASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 AC026464.5-201ENST00000562497 722 ntBASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 MIR4635-201ENST00000583759 79 ntBASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 AC019193.3-201ENST00000609144 554 ntBASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.47□□□□□ -2.01
POLR1BQ9H9Y6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.46□□□□□ -2.01
POLR1BQ9H9Y6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 RNA5SP289-201ENST00000362332 137 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 U8.8-201ENST00000365399 135 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 RNU6-784P-201ENST00000384330 106 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 Y_RNA.504-201ENST00000384481 104 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 MIR521-1-201ENST00000384902 87 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 AC007064.1-201ENST00000412238 351 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 Z82209.1-201ENST00000422141 2135 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 CBX3P6-201ENST00000430257 527 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 AL353572.1-201ENST00000442490 417 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 PMCHL2-203ENST00000457791 237 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 PTP4A1P4-201ENST00000512479 322 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 AL117351.2-201ENST00000513571 157 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 RN7SKP24-201ENST00000515888 284 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 RNA5SP320-201ENST00000516263 124 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 RNU1-104P-201ENST00000517280 175 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 MIR3923-201ENST00000579521 83 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 FGF7P1-201ENST00000582820 288 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 AL161423.1-201ENST00000613700 262 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 AC090517.3-201ENST00000625170 141 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 SNORA43.4-201ENST00000629559 138 ntBASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.46□□□□□ -2.02
POLR1BQ9H9Y6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms