Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 MIR449C-201ENST00000516047 92 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 AC103996.1-201ENST00000555468 102 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 DEFB122-202ENST00000569013 197 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 MIR3136-201ENST00000583498 78 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 AC007684.1-201ENST00000609671 477 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 MIR8081-201ENST00000611533 95 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 AL354950.2-201ENST00000617939 290 ntBASIC1.7□□□□□ -2.14
POLR1EQ9GZS1 RNU4-15P-201ENST00000362613 141 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 RNA5SP493-201ENST00000364115 91 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 RNU6-827P-201ENST00000365553 106 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 SNORD116-9-201ENST00000384000 95 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 SNORD116-3-201ENST00000384287 95 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 RNU6-43P-201ENST00000384302 107 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 SNORD116-7-201ENST00000384404 95 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 SNORD116-5-201ENST00000384462 95 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 MIR504-201ENST00000385065 83 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 RPS29P13-201ENST00000402041 169 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 RPL31P3-201ENST00000458430 332 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 RNU6-333P-201ENST00000459117 107 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 RNU7-167P-201ENST00000459160 62 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 AC108078.1-201ENST00000508073 725 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 AC091133.4-201ENST00000511142 308 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 AC010493.1-201ENST00000513479 292 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 MIR3683-201ENST00000580847 82 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 MIR4298-201ENST00000584380 73 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 RMST_6.1-201ENST00000611980 203 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 AL590240.4-201ENST00000616908 390 ntBASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.69□□□□□ -2.14
POLR1EQ9GZS1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 Y_RNA.1-201ENST00000352915 104 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 Y_RNA.296-201ENST00000364930 108 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 MIR30A-201ENST00000385092 71 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 Y_RNA.582-201ENST00000391023 95 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 SNORA12-201ENST00000391162 147 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 MIR934-201ENST00000401241 83 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AL358453.1-201ENST00000422522 250 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AC010975.2-201ENST00000427781 588 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AL606489.2-201ENST00000433886 234 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AC027575.1-201ENST00000481064 460 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AL163973.1-201ENST00000484753 577 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 HMGB1P29-201ENST00000505659 499 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AC005741.1-201ENST00000511094 432 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 RNVU1-2-201ENST00000516326 135 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 COPS8P3-201ENST00000526024 482 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 MTND1P15-201ENST00000579262 949 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 MIR4285-201ENST00000581001 85 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 BNIP3P16-201ENST00000589779 534 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 MTND4P14-201ENST00000435799 1354 ntBASIC1.68□□□□□ -2.14
POLR1EQ9GZS1 SNORD32B-201ENST00000364460 84 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 RNU6-1141P-201ENST00000364520 107 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 SNORD32A-201ENST00000364805 84 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 RNU6-26P-201ENST00000383985 107 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 RNU6-142P-201ENST00000384019 107 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 SNORD116-1-201ENST00000384335 95 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 RNU6-1119P-201ENST00000384349 108 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 CYCSP49-201ENST00000420810 319 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 AL590135.1-201ENST00000422215 156 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 AC019205.3-201ENST00000424573 156 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 AC016700.2-201ENST00000446011 156 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 HMGN2P18-201ENST00000450680 270 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 AC112492.4-201ENST00000456549 352 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 AC015911.1-201ENST00000495111 156 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 FAM206BP-201ENST00000510179 541 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 SNORA31.16-201ENST00000516773 139 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 RNU6-548P-201ENST00000517083 115 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 CBX3P4-201ENST00000538909 354 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 AC090115.3-201ENST00000553218 849 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 MIR3611-201ENST00000584484 83 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 MIR4424-201ENST00000585257 86 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 HULC.1-201ENST00000612720 240 ntBASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
POLR1EQ9GZS1 MIR126-201ENST00000362291 85 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms