Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-575P-201ENST00000411326 105 ntBASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 AL606517.1-201ENST00000446914 387 ntBASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 NFU1P2-201ENST00000448700 469 ntBASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 AC240442.1-201ENST00000616055 283 ntBASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 AL357080.1-201ENST00000617394 239 ntBASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 OR5AK4P-201ENST00000635912 903 ntBASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 AL159152.1-201ENST00000635019 2587 ntBASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 AC107982.1-201ENST00000507171 1300 ntBASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.11□□□□□ -2.43
SCAPERQ9BY12 SNORD56.4-201ENST00000363883 71 ntBASIC-0.12□□□□□ -2.43
SCAPERQ9BY12 RNA5SP368-201ENST00000364298 116 ntBASIC-0.12□□□□□ -2.43
SCAPERQ9BY12 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
SCAPERQ9BY12 SNORA40C-201ENST00000391285 128 ntBASIC-0.12□□□□□ -2.43
SCAPERQ9BY12 AC013262.1-201ENST00000426710 252 ntBASIC-0.12□□□□□ -2.43
SCAPERQ9BY12 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.12□□□□□ -2.43
SCAPERQ9BY12 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.12□□□□□ -2.43
SCAPERQ9BY12 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC-0.12□□□□□ -2.43
SCAPERQ9BY12 EIF1P4-201ENST00000572664 335 ntBASIC-0.12□□□□□ -2.43
SCAPERQ9BY12 MIR3678-201ENST00000578455 94 ntBASIC-0.12□□□□□ -2.43
SCAPERQ9BY12 MIR4431-201ENST00000579990 94 ntBASIC-0.12□□□□□ -2.43
SCAPERQ9BY12 AC073349.3-201ENST00000617616 186 ntBASIC-0.12□□□□□ -2.43
SCAPERQ9BY12 SNORD114-15-201ENST00000364687 72 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 SNORA4.2-201ENST00000365313 147 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 MTATP6P9-201ENST00000515039 680 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AC091163.3-201ENST00000518269 1144 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AC023538.1-201ENST00000534576 736 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AL136520.1-202ENST00000555494 763 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 BNIP3P9-201ENST00000603714 553 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AC116165.2-201ENST00000616705 206 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AL159153.1-201ENST00000619688 317 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 SNORA36.2-201ENST00000384004 127 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 RNU6-166P-201ENST00000384371 107 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 MTND4P24-201ENST00000424002 397 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AC114981.1-201ENST00000503897 678 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AP003049.1-201ENST00000529418 457 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 MIR4493-201ENST00000584016 73 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AP001180.6-201ENST00000584918 159 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 AC006001.4-201ENST00000622243 395 ntBASIC-0.13□□□□□ -2.43
SCAPERQ9BY12 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 RNU6V-201ENST00000384105 107 ntBASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 MIR214-201ENST00000385214 110 ntBASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 RNA5SP219-201ENST00000390940 113 ntBASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 AC068533.2-201ENST00000411872 306 ntBASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 MTCO3P41-201ENST00000414801 328 ntBASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 PDCL2P1-201ENST00000419302 352 ntBASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 AC244098.3-201ENST00000424803 96 ntBASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 SNRPEP8-201ENST00000442866 260 ntBASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 snoU13.19-201ENST00000459148 104 ntBASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 RNU7-34P-201ENST00000459394 64 ntBASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 MIR1264-201ENST00000616374 69 ntBASIC-0.14□□□□□ -2.43
SCAPERQ9BY12 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 RNA5SP264-201ENST00000363115 107 ntBASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 AC016831.2-201ENST00000417179 352 ntBASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 MTCO2P1-201ENST00000424648 477 ntBASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 RPL39P36-201ENST00000490784 156 ntBASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 RPF2P2-201ENST00000504693 896 ntBASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 AC090888.2-201ENST00000559765 1144 ntBASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 AC025678.1-201ENST00000567861 338 ntBASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.15□□□□□ -2.43
SCAPERQ9BY12 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 MIR103A1-201ENST00000362165 78 ntBASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 RNU6-216P-201ENST00000363282 104 ntBASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 RNY4P3-201ENST00000365254 95 ntBASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 RNA5SP222-201ENST00000411039 105 ntBASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 MTND5P2-201ENST00000442927 1142 ntBASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 MTCO3P28-201ENST00000513351 515 ntBASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 AC011979.2-201ENST00000527568 352 ntBASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 AC016256.1-201ENST00000547971 354 ntBASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 SNRPGP1-201ENST00000553864 222 ntBASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 MIR4666A-201ENST00000580160 79 ntBASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 AL445264.1-201ENST00000621719 171 ntBASIC-0.16□□□□□ -2.44
SCAPERQ9BY12 MIR4315-1-201ENST00000636800 73 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms