Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 Y_RNA.478-201ENST00000384358 107 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 MT-TW-201ENST00000387382 68 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 SNORA48.8-201ENST00000391324 134 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 RPS4XP3-201ENST00000398541 413 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.28□□□□□ -1.88
SALL3Q9BXA9 RNU2-33P-201ENST00000410344 192 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.28□□□□□ -1.88
SALL3Q9BXA9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.28□□□□□ -1.88
SALL3Q9BXA9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SALL3Q9BXA9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.28□□□□□ -1.88
SALL3Q9BXA9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.28□□□□□ -1.88
SALL3Q9BXA9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.28□□□□□ -1.88
SALL3Q9BXA9 SNORA31.1-201ENST00000515993 133 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 RNU6-1023P-201ENST00000516137 106 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 SNORA31.5-201ENST00000516190 133 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 RNA5SP367-201ENST00000516557 118 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.28□□□□□ -1.88
SALL3Q9BXA9 AC078899.3-201ENST00000599065 212 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 AL390123.1-201ENST00000603216 237 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 AC009314.1-201ENST00000603871 304 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 AC090132.2-201ENST00000615881 347 ntBASIC3.28□□□□□ -1.88
SALL3Q9BXA9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SALL3Q9BXA9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SALL3Q9BXA9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.28□□□□□ -1.88
SALL3Q9BXA9 ZNF72P-201ENST00000425869 1908 ntBASIC3.28□□□□□ -1.89
SALL3Q9BXA9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
SALL3Q9BXA9 Y_RNA.183-201ENST00000363882 113 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 RNU6-827P-201ENST00000365553 106 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 RNU6-1062P-201ENST00000383908 107 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 MIR521-1-201ENST00000384902 87 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 MIR34A-201ENST00000385130 110 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SALL3Q9BXA9 Y_RNA.592-201ENST00000410274 109 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.27□□□□□ -1.89
SALL3Q9BXA9 OOSP1P1-201ENST00000423265 274 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 TOMM20P4-201ENST00000427861 435 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 ARL5AP4-201ENST00000430731 512 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 HIGD1AP2-201ENST00000446367 280 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 AC010265.1-201ENST00000513509 211 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 SNORA40.15-201ENST00000516884 107 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 RNA5SP290-201ENST00000517133 127 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 RNU6-897P-201ENST00000517135 105 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 AC091144.1-201ENST00000519573 138 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 AC034114.1-201ENST00000520293 285 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 AC025755.1-201ENST00000521306 278 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.27□□□□□ -1.89
SALL3Q9BXA9 AL133393.1-201ENST00000603277 287 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 RAC1P9-201ENST00000604990 392 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 AC078938.1-201ENST00000620993 318 ntBASIC3.27□□□□□ -1.89
SALL3Q9BXA9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SALL3Q9BXA9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.27□□□□□ -1.89
SALL3Q9BXA9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SALL3Q9BXA9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 Y_RNA.14-201ENST00000362415 103 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 Y_RNA.19-201ENST00000362462 99 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 SNORD50.1-201ENST00000362987 71 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 RNU6-741P-201ENST00000383889 107 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 SNORA51.11-201ENST00000384442 131 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 RNA5SP38-201ENST00000410750 119 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 RNA5SP344-201ENST00000411081 104 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 AL590383.1-201ENST00000428602 75 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 OR2AQ1P-201ENST00000451972 200 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 RN7SKP210-201ENST00000459176 261 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 SNORA70.16-201ENST00000516390 95 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 RNU6-1256P-201ENST00000516539 103 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 RNA5SP291-201ENST00000517222 105 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 AC090517.1-201ENST00000569307 266 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 MIR4672-201ENST00000583126 81 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 AC008121.1-201ENST00000603244 268 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 AC009318.2-201ENST00000610917 651 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 MIR1244-1-201ENST00000612829 85 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 AL161629.2-201ENST00000615347 275 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 AC138627.2-201ENST00000624202 601 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 AL137790.1-201ENST00000634283 177 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 MIR1244-3-201ENST00000635744 85 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 MIR1244-2-201ENST00000636449 85 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 MIR1244-4-202ENST00000636813 85 ntBASIC3.26□□□□□ -1.89
SALL3Q9BXA9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
SALL3Q9BXA9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.25□□□□□ -1.89
SALL3Q9BXA9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SALL3Q9BXA9 RNY3P11-201ENST00000364153 102 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 Y_RNA.471-201ENST00000384312 102 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 RNU6-166P-201ENST00000384371 107 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 SNORA1.3-201ENST00000384676 136 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SALL3Q9BXA9 RNU6-1093P-201ENST00000391194 107 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 AL512633.1-201ENST00000399931 655 ntBASIC3.25□□□□□ -1.89
SALL3Q9BXA9 RPS29P13-201ENST00000402041 169 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms