Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC026371.1-201ENST00000551867 419 ntBASIC1.96□□□□□ -2.1
SSX3Q99909 AC021231.3-201ENST00000558497 370 ntBASIC1.96□□□□□ -2.1
SSX3Q99909 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.96□□□□□ -2.1
SSX3Q99909 MIR3923-201ENST00000579521 83 ntBASIC1.96□□□□□ -2.1
SSX3Q99909 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.96□□□□□ -2.1
SSX3Q99909 FAM157A-202ENST00000615155 405 ntBASIC1.96□□□□□ -2.1
SSX3Q99909 AL132822.1-201ENST00000617063 513 ntBASIC1.96□□□□□ -2.1
SSX3Q99909 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.96□□□□□ -2.1
SSX3Q99909 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.96□□□□□ -2.1
SSX3Q99909 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SSX3Q99909 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SSX3Q99909 RNA5SP289-201ENST00000362332 137 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 RNU6-227P-201ENST00000362865 103 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 RNU6-254P-201ENST00000363377 107 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 SNORD113-7-201ENST00000363762 77 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 RNU6-1317P-201ENST00000364582 104 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SSX3Q99909 XGY1-201ENST00000381172 446 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 SNORA67.4-201ENST00000384688 142 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 SNORA26.3-201ENST00000391119 136 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 SNORA12-201ENST00000391162 147 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 MIR1262-201ENST00000408276 93 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 MIR1294-201ENST00000408503 142 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 RNU6-373P-201ENST00000411247 98 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 MTND3P9-201ENST00000429526 346 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 RPL23AP6-201ENST00000446637 472 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 RN7SL429P-201ENST00000479090 223 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 RN7SL489P-201ENST00000486185 223 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 RN7SL327P-201ENST00000488659 223 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 AC104564.1-201ENST00000493028 407 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 AC114801.2-201ENST00000503825 781 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 AC234781.5-201ENST00000508429 271 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 MTND1P5-201ENST00000517906 940 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 SCOCP1-201ENST00000554676 349 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 AC100830.2-201ENST00000581636 240 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 AC078795.3-201ENST00000602913 472 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 AC013412.1-201ENST00000610687 192 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 RMST_3.1-201ENST00000611651 109 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 RN7SL853P-201ENST00000617250 223 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 uc_338.20-201ENST00000621563 178 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 AP000553.5-201ENST00000641933 54 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 AC008555.8-201ENST00000623602 2168 ntBASIC1.95□□□□□ -2.1
SSX3Q99909 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SSX3Q99909 Y_RNA.6-201ENST00000362350 114 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 Y_RNA.89-201ENST00000363031 102 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SSX3Q99909 RNU6-128P-201ENST00000383976 107 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 Y_RNA.453-201ENST00000384223 109 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 Y_RNA.530-201ENST00000384587 101 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 RNU4-53P-201ENST00000410828 140 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SSX3Q99909 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.94□□□□□ -2.1
SSX3Q99909 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 BX510359.4-201ENST00000423750 193 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.94□□□□□ -2.1
SSX3Q99909 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.94□□□□□ -2.1
SSX3Q99909 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.94□□□□□ -2.1
SSX3Q99909 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.94□□□□□ -2.1
SSX3Q99909 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.94□□□□□ -2.1
SSX3Q99909 RNU6-567P-201ENST00000516746 107 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 HSPE1P18-201ENST00000517602 280 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 AP005660.1-201ENST00000522972 293 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.94□□□□□ -2.1
SSX3Q99909 AC091544.4-201ENST00000555268 342 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 MIR4298-201ENST00000584380 73 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 AL078605.1-201ENST00000603529 500 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 AC005034.5-201ENST00000604219 466 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 CTHRC1P1-201ENST00000605383 469 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 AC104458.1-201ENST00000608243 463 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 AC064859.1-201ENST00000624741 174 ntBASIC1.94□□□□□ -2.1
SSX3Q99909 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SSX3Q99909 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SSX3Q99909 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SSX3Q99909 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SSX3Q99909 MIR21-201ENST00000362134 72 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 RNU6-1252P-201ENST00000363054 104 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 SNORD114-30-201ENST00000364448 72 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 Y_RNA.295-201ENST00000364918 102 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 RNU6-933P-201ENST00000384424 107 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 SNORD115-47-201ENST00000391226 86 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 RNU6-325P-201ENST00000411132 105 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 AL158823.1-201ENST00000418441 478 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.93□□□□□ -2.1
SSX3Q99909 AC007547.1-201ENST00000462177 490 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 RPS29P27-201ENST00000463711 170 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 MTCO1P29-201ENST00000496868 288 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 TRBVA-201ENST00000498804 316 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.93□□□□□ -2.1
SSX3Q99909 AC026436.1-201ENST00000510537 270 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 MRPS17P9-201ENST00000511924 393 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 ANP32BP3-201ENST00000559213 706 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 AL109918.3-201ENST00000603072 338 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 Z98751.3-201ENST00000604447 521 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 AP000654.2-201ENST00000605633 586 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 AC090517.2-201ENST00000614966 680 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 AL359314.1-201ENST00000616913 261 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 MIR1291-201ENST00000627649 87 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 SNORA43.4-201ENST00000629559 138 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 243 ms