Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MTND4P18-201ENST00000447010 465 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 FTH1P25-201ENST00000447665 469 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 SNORD5.1-201ENST00000458800 75 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 Y_RNA.635-201ENST00000459041 101 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 MRPS36P4-201ENST00000534436 298 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 MIR4635-201ENST00000583759 79 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 AP000654.2-201ENST00000605633 586 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 MIR6840-201ENST00000611937 71 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 PCGEM1.1-201ENST00000613431 131 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.44□□□□□ -2.02
NR1H4Q96RI1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NR1H4Q96RI1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.43□□□□□ -2.02
NR1H4Q96RI1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.43□□□□□ -2.02
NR1H4Q96RI1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NR1H4Q96RI1 AC131280.1-202ENST00000624067 4211 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.43□□□□□ -2.02
NR1H4Q96RI1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.43□□□□□ -2.02
NR1H4Q96RI1 SNORD50.1-201ENST00000362987 71 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 SNORD46.1-201ENST00000364139 104 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 Y_RNA.482-201ENST00000384377 111 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 MIR34B-201ENST00000385076 84 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 SNORA12-201ENST00000391162 147 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 RNU6-1093P-201ENST00000391194 107 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.43□□□□□ -2.02
NR1H4Q96RI1 Y_RNA.691-201ENST00000516611 103 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 RNU6-965P-201ENST00000516721 96 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.43□□□□□ -2.02
NR1H4Q96RI1 CYCSP26-201ENST00000534107 320 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.43□□□□□ -2.02
NR1H4Q96RI1 EIF4A1P12-201ENST00000551910 141 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.43□□□□□ -2.02
NR1H4Q96RI1 AC018462.2-201ENST00000605375 395 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 AC009318.2-201ENST00000610917 651 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 AC005520.5-201ENST00000613926 164 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 PISRT1.1-201ENST00000616930 107 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.43□□□□□ -2.02
NR1H4Q96RI1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NR1H4Q96RI1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NR1H4Q96RI1 MIR422A-201ENST00000362286 90 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 RNU5B-2P-201ENST00000363036 113 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 Y_RNA.142-201ENST00000363491 102 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 RNU4-9P-201ENST00000364951 139 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 Y_RNA.339-201ENST00000365325 102 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 SNORA48.5-201ENST00000391143 135 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.42□□□□□ -2.02
NR1H4Q96RI1 AL139132.1-201ENST00000431587 344 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 AC092473.1-201ENST00000441098 221 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 MTND5P20-201ENST00000448677 143 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 snoU13.6-201ENST00000458785 104 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.42□□□□□ -2.02
NR1H4Q96RI1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.42□□□□□ -2.02
NR1H4Q96RI1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.42□□□□□ -2.02
NR1H4Q96RI1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.42□□□□□ -2.02
NR1H4Q96RI1 AC005741.1-201ENST00000511094 432 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 Y_RNA.708-201ENST00000516950 96 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 RNU6-667P-201ENST00000517186 102 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.42□□□□□ -2.02
NR1H4Q96RI1 AC026271.5-201ENST00000577873 130 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 BNIP3P22-201ENST00000593399 556 ntBASIC2.42□□□□□ -2.02
NR1H4Q96RI1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NR1H4Q96RI1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
NR1H4Q96RI1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NR1H4Q96RI1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
NR1H4Q96RI1 MTND4P12-201ENST00000498999 1377 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
NR1H4Q96RI1 RNA5SP374-201ENST00000362939 125 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 SNORD32B-201ENST00000364460 84 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 RNU6-26P-201ENST00000383985 107 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 RNU1-52P-201ENST00000384190 164 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 RNU6-378P-201ENST00000384324 107 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 MIR524-201ENST00000385242 87 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 AL356432.1-201ENST00000405809 419 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 RNU6-174P-201ENST00000410406 106 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 ARL5AP4-201ENST00000430731 512 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.41□□□□□ -2.02
NR1H4Q96RI1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.41□□□□□ -2.02
NR1H4Q96RI1 IPO7P1-201ENST00000442031 636 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.41□□□□□ -2.02
NR1H4Q96RI1 AC079354.2-201ENST00000453523 154 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.41□□□□□ -2.02
NR1H4Q96RI1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.41□□□□□ -2.02
NR1H4Q96RI1 AC087477.1-201ENST00000465747 340 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 FO393415.2-201ENST00000480085 343 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 AC068781.1-201ENST00000488231 618 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.41□□□□□ -2.02
NR1H4Q96RI1 SNORA4.4-201ENST00000515921 135 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 AC034114.1-201ENST00000520293 285 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 SCARNA4-201ENST00000629045 128 ntBASIC2.41□□□□□ -2.02
NR1H4Q96RI1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NR1H4Q96RI1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NR1H4Q96RI1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
NR1H4Q96RI1 Y_RNA.2-201ENST00000362330 96 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms