Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RNU1-93P-201ENST00000364704 169 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 RNU6-17P-201ENST00000384245 107 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 Y_RNA.465-201ENST00000384293 102 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 RNU6-18P-201ENST00000384527 107 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 RNU6-1054P-201ENST00000411293 104 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 HIGD1AP15-201ENST00000416198 280 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC42Q96M95 AC243964.1-201ENST00000441814 261 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.56□□□□□ -2.32
CCDC42Q96M95 RNU7-34P-201ENST00000459394 64 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC42Q96M95 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.56□□□□□ -2.32
CCDC42Q96M95 RNU6-237P-201ENST00000515985 71 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 RNU6-123P-201ENST00000516163 102 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 RNU5F-4P-201ENST00000516581 114 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 AC107934.1-201ENST00000522215 217 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 AL590705.4-201ENST00000532209 134 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 AC025423.5-201ENST00000550230 219 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 HSPE1P4-201ENST00000550617 308 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 AL121579.1-201ENST00000555129 305 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 CYP3A137P-201ENST00000562436 69 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC42Q96M95 MIR4742-201ENST00000581069 85 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 AC105148.1-201ENST00000604961 409 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 AC084824.5-201ENST00000612009 413 ntBASIC0.56□□□□□ -2.32
CCDC42Q96M95 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
CCDC42Q96M95 U3.9-201ENST00000363823 204 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 RNU6-1141P-201ENST00000364520 107 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 RNU4-56P-201ENST00000364700 142 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 SNORA72.2-201ENST00000365028 127 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 EEF1A1P40-201ENST00000412883 573 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 RPS26P5-201ENST00000418544 335 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.55□□□□□ -2.32
CCDC42Q96M95 AL590135.1-201ENST00000422215 156 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 AC019205.3-201ENST00000424573 156 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 AC244670.1-201ENST00000436879 112 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 AC016700.2-201ENST00000446011 156 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.55□□□□□ -2.32
CCDC42Q96M95 MTND1P12-201ENST00000455231 147 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 AC015911.1-201ENST00000495111 156 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.55□□□□□ -2.32
CCDC42Q96M95 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.55□□□□□ -2.32
CCDC42Q96M95 RNA5SP384-201ENST00000516615 116 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 RNU6-1003P-201ENST00000517099 105 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 SUMO2P16-201ENST00000519475 264 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 ZNF321P-202ENST00000550843 495 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.55□□□□□ -2.32
CCDC42Q96M95 AC021231.3-201ENST00000558497 370 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 AC090888.2-201ENST00000559765 1144 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.55□□□□□ -2.32
CCDC42Q96M95 AL139286.2-201ENST00000606838 396 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 AC006927.4-201ENST00000639187 543 ntBASIC0.55□□□□□ -2.32
CCDC42Q96M95 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
CCDC42Q96M95 MIR605-201ENST00000385078 83 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 AC060773.1-201ENST00000421698 310 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC42Q96M95 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.54□□□□□ -2.32
CCDC42Q96M95 AC007547.1-201ENST00000462177 490 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 AC048334.1-201ENST00000477975 159 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 RPS27P22-201ENST00000478056 241 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 AC011406.1-201ENST00000512440 370 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 SNORD79.1-201ENST00000516069 84 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.54□□□□□ -2.32
CCDC42Q96M95 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.54□□□□□ -2.32
CCDC42Q96M95 MIR3923-201ENST00000579521 83 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 MIR4307-201ENST00000582802 84 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 RPL17P51-201ENST00000605218 238 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 BNIP3P10-201ENST00000605360 577 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC42Q96M95 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 AC099786.3-201ENST00000565735 1410 ntBASIC0.54□□□□□ -2.32
CCDC42Q96M95 AL391994.1-201ENST00000254724 282 ntBASIC0.53□□□□□ -2.32
CCDC42Q96M95 RNA5SP361-201ENST00000362686 118 ntBASIC0.53□□□□□ -2.32
CCDC42Q96M95 RNU1-76P-201ENST00000362903 159 ntBASIC0.53□□□□□ -2.32
CCDC42Q96M95 RNU6-43P-201ENST00000384302 107 ntBASIC0.53□□□□□ -2.32
CCDC42Q96M95 RPS20P2-201ENST00000402520 389 ntBASIC0.53□□□□□ -2.32
CCDC42Q96M95 AP000797.1-201ENST00000478870 387 ntBASIC0.53□□□□□ -2.32
CCDC42Q96M95 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
CCDC42Q96M95 AC067942.3-201ENST00000512025 362 ntBASIC0.53□□□□□ -2.32
CCDC42Q96M95 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.53□□□□□ -2.32
CCDC42Q96M95 MIR5692A1-201ENST00000580523 69 ntBASIC0.53□□□□□ -2.32
CCDC42Q96M95 AL139022.2-201ENST00000606934 443 ntBASIC0.53□□□□□ -2.32
CCDC42Q96M95 PCGEM1.1-201ENST00000613431 131 ntBASIC0.53□□□□□ -2.32
CCDC42Q96M95 MIR338-201ENST00000636369 67 ntBASIC0.53□□□□□ -2.32
CCDC42Q96M95 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
CCDC42Q96M95 Y_RNA.132-201ENST00000363421 102 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 RNU6-877P-201ENST00000383868 107 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 RNU6-1026P-201ENST00000384465 108 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 RNU6-110P-201ENST00000384508 104 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.52□□□□□ -2.33
CCDC42Q96M95 RPL23AP95-201ENST00000426806 265 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 AC010975.2-201ENST00000427781 588 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 AL603825.1-201ENST00000438481 80 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.52□□□□□ -2.33
CCDC42Q96M95 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.52□□□□□ -2.33
CCDC42Q96M95 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.52□□□□□ -2.33
CCDC42Q96M95 HMGN1P12-201ENST00000499125 195 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 AP001893.2-201ENST00000526949 202 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms