Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 AC097473.1-201ENST00000508142 408 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 AC005741.1-201ENST00000511094 432 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 RNA5SP384-201ENST00000516615 116 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 MIR4446-201ENST00000578505 67 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 MIR3616-201ENST00000584070 92 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 AC023043.3-201ENST00000593113 385 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 RPL30P11-203ENST00000598995 310 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 7SK.7-201ENST00000603504 247 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 AL359314.1-201ENST00000616913 261 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 AC090574.1-201ENST00000623186 233 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 SNORA43.4-201ENST00000629559 138 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 FO624990.1-201ENST00000636373 85 ntBASIC3.27□□□□□ -1.89
CHMP4CQ96CF2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 ZNF299P-201ENST00000406845 1804 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 Y_RNA.315-201ENST00000365117 102 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 RNU1-109P-201ENST00000383960 147 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 Y_RNA.500-201ENST00000384466 111 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 Y_RNA.533-201ENST00000384596 114 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 RNU6-331P-201ENST00000384724 107 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 MIR592-201ENST00000384959 97 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 MIR627-201ENST00000384979 97 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 AL356057.3-201ENST00000402607 340 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 AIMP1P2-201ENST00000425294 312 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 AC079354.2-201ENST00000453523 154 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 RNU5F-2P-201ENST00000516066 82 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 SCARNA16.2-201ENST00000516520 172 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 RNU6-567P-201ENST00000516746 107 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 AC060766.3-201ENST00000591442 263 ntBASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHMP4CQ96CF2 AC073544.1-201ENST00000600110 1595 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 CBX3P9-201ENST00000402326 552 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 AL138827.1-201ENST00000402666 306 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 ARL5AP4-201ENST00000430731 512 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 MTCO3P10-201ENST00000455912 772 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 AC003982.1-202ENST00000469928 248 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 HMGB1P35-201ENST00000503360 598 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 CBX3P8-201ENST00000532412 525 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 MRPS36P4-201ENST00000534436 298 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 ELOCP29-201ENST00000588193 334 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 AL034555.1-201ENST00000604816 211 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 AC092608.2-201ENST00000624427 218 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 AC080100.1-201ENST00000624239 5356 ntBASIC3.25□□□□□ -1.89
CHMP4CQ96CF2 MIR449A-201ENST00000362113 91 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 Y_RNA.48-201ENST00000362710 103 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 SET-203ENST00000372688 801 ntTSL 2 BASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 RNU6-890P-201ENST00000384121 107 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 SNORA26.3-201ENST00000391119 136 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 SNORA75.6-201ENST00000391318 127 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 AL590556.1-201ENST00000423231 483 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 HMGN1P13-201ENST00000505795 138 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 SNORA31.16-201ENST00000516773 139 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 RNU6-264P-201ENST00000517134 104 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 MIR5571-201ENST00000577998 113 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 MIR5696-201ENST00000578474 85 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 MIR3117-201ENST00000584034 78 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 AL158827.2-201ENST00000602494 330 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 AL356280.1-201ENST00000603614 379 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 AL133255.1-201ENST00000606374 441 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 AC090517.3-201ENST00000625170 141 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 AL691447.3-201ENST00000635020 330 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 AL136360.1-201ENST00000503377 1900 ntBASIC3.24□□□□□ -1.89
CHMP4CQ96CF2 MTND5P10-201ENST00000603719 1809 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 Y_RNA.146-201ENST00000363549 102 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 RNU6-1180P-201ENST00000364935 107 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 SNORA29-201ENST00000384183 140 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 SNORA36A-201ENST00000384221 132 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 MIR196B-201ENST00000384852 84 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 SNORA11.2-201ENST00000408318 127 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 RNA5SP494-201ENST00000410653 129 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 RPL19P1-201ENST00000411635 428 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 RPS20P15-201ENST00000412792 311 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 AL353997.1-201ENST00000432936 108 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 UBBP3-201ENST00000445497 241 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 ELOCP24-201ENST00000456370 334 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 AC080013.2-201ENST00000460866 323 ntBASIC3.23□□□□□ -1.89
CHMP4CQ96CF2 RPS27AP9-201ENST00000477681 438 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms