Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 Y_RNA.490-201ENST00000384413 102 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 MIR196B-201ENST00000384852 84 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 Y_RNA.594-201ENST00000410373 140 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 RNU6-1050P-201ENST00000410388 107 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 RNU6-370P-201ENST00000411008 104 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 CYCSP48-201ENST00000417124 323 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AIMP1P2-201ENST00000425294 312 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 SNORD109B-201ENST00000458961 67 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 Y_RNA.635-201ENST00000459041 101 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 SNORD109A-201ENST00000459128 67 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AC090525.1-201ENST00000479116 478 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AC104564.1-201ENST00000493028 407 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AC026782.1-201ENST00000512952 449 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 RNU6-559P-201ENST00000516151 98 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 Y_RNA.670-201ENST00000516255 105 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 RNU6-277P-201ENST00000516272 106 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 RNU6-1016P-201ENST00000516689 94 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AC115990.1-201ENST00000526957 301 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AC004486.1-201ENST00000546846 233 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AC109446.1-201ENST00000566172 220 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AL355375.2-201ENST00000574825 175 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AC009229.3-201ENST00000608056 282 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 U4atac.1-201ENST00000618345 95 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 SNORD98-201ENST00000636377 67 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 AC099654.5-201ENST00000636479 350 ntBASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SH3KBP1Q96B97 Y_RNA.67-201ENST00000362870 100 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 RNU6-842P-201ENST00000384269 107 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 AC022028.1-201ENST00000412054 408 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 AC003685.2-201ENST00000422795 395 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 AL353752.1-201ENST00000454946 260 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 snoU13.14-201ENST00000459372 104 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 RPL30P1-201ENST00000488676 339 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 CKS1BP2-201ENST00000497342 240 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 AC096725.1-201ENST00000514266 313 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 Y_RNA.675-201ENST00000516389 149 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 FRG2DP-202ENST00000566967 323 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 AL670379.2-201ENST00000604983 252 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 AC113139.1-201ENST00000605049 239 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 AC018462.2-201ENST00000605375 395 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 MIR6715A-201ENST00000615929 79 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 PISRT1.1-201ENST00000616930 107 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 MIR5739-201ENST00000619803 80 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 SNORA43.4-201ENST00000629559 138 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 MTND4LP32-201ENST00000636111 270 ntBASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SH3KBP1Q96B97 AL136360.1-201ENST00000503377 1900 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 RNU1-72P-201ENST00000362976 153 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 RNU6-1210P-201ENST00000363775 107 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 Y_RNA.482-201ENST00000384377 111 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 RNU6-331P-201ENST00000384724 107 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 DAP3P1-201ENST00000441522 278 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 AL109933.2-201ENST00000452651 260 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 AC016632.1-201ENST00000503994 196 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 ELOCP31-201ENST00000540463 467 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 RAB11AP2-201ENST00000545905 639 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 AC079600.2-201ENST00000550076 130 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 AC011494.1-201ENST00000596454 237 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 AC078795.3-201ENST00000602913 472 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 AC092608.2-201ENST00000624427 218 ntBASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.66□□□□□ -1.98
SH3KBP1Q96B97 AC080100.1-201ENST00000624239 5356 ntBASIC2.65□□□□□ -1.98
SH3KBP1Q96B97 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 SNORD50.1-201ENST00000362987 71 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 RNU4-73P-201ENST00000363164 141 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 Y_RNA.384-201ENST00000383909 102 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 Y_RNA.404-201ENST00000383978 102 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 SNORA75.4-201ENST00000391278 119 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 RNU2-63P-201ENST00000410792 194 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 NCOR1P3-201ENST00000420479 303 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 RPL23AP95-201ENST00000426806 265 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 AP000705.1-201ENST00000454567 350 ntBASIC2.65□□□□□ -1.99
SH3KBP1Q96B97 CYP2C59P-201ENST00000457790 269 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms