Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AC005296.1-201ENST00000616145 209 ntBASIC2.59□□□□□ -1.99
NPIPB3Q92617 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.59□□□□□ -1.99
NPIPB3Q92617 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
NPIPB3Q92617 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NPIPB3Q92617 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
NPIPB3Q92617 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NPIPB3Q92617 ZNF72P-201ENST00000425869 1908 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 RNU6-873P-201ENST00000363833 107 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 RNU6-879P-201ENST00000364328 108 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 SNORD32B-201ENST00000364460 84 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 RNU6-1180P-201ENST00000364935 107 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 SNORD14.1-201ENST00000365609 90 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.58□□□□□ -2
NPIPB3Q92617 SNORA12-201ENST00000391162 147 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.58□□□□□ -2
NPIPB3Q92617 AC112220.1-201ENST00000434628 355 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.58□□□□□ -2
NPIPB3Q92617 U8.22-201ENST00000459141 133 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 RNU1-143P-201ENST00000516296 146 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.58□□□□□ -2
NPIPB3Q92617 MIR3160-1-201ENST00000577972 85 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 U1.23-201ENST00000610293 146 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.58□□□□□ -2
NPIPB3Q92617 RNU1-68P-201ENST00000615382 146 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 AC005562.2-201ENST00000618264 111 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 U1.39-201ENST00000621562 146 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 AC009093.8-201ENST00000641769 292 ntBASIC2.58□□□□□ -2
NPIPB3Q92617 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.58□□□□□ -2
NPIPB3Q92617 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.58□□□□□ -2
NPIPB3Q92617 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.58□□□□□ -2
NPIPB3Q92617 Z82209.1-201ENST00000422141 2135 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPIPB3Q92617 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
NPIPB3Q92617 MIR148B-201ENST00000362252 99 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 Y_RNA.27-201ENST00000362540 103 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
NPIPB3Q92617 Y_RNA.389-201ENST00000383924 113 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 SNORA5A-201ENST00000384111 134 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 RNY3P4-201ENST00000384428 101 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 MIR95-201ENST00000385072 81 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.57□□□□□ -2
NPIPB3Q92617 RNA5SP213-201ENST00000391031 106 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 MIR1294-201ENST00000408503 142 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 RNU6-101P-201ENST00000410323 104 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 Y_RNA.625-201ENST00000411256 107 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 UBBP3-201ENST00000445497 241 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.57□□□□□ -2
NPIPB3Q92617 RBMY2UP-201ENST00000453474 324 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 AC106707.2-201ENST00000484182 374 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 RN7SKP21-201ENST00000516503 220 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 RNU6-56P-201ENST00000516986 93 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 SCARNA20.6-201ENST00000517251 106 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 AC022616.4-201ENST00000522985 181 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 AC018630.3-201ENST00000542637 96 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 AP002770.2-201ENST00000543613 532 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 AC093023.1-201ENST00000547375 507 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.57□□□□□ -2
NPIPB3Q92617 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.57□□□□□ -2
NPIPB3Q92617 AC023043.3-201ENST00000593113 385 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 RPS29P30-201ENST00000600975 111 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 AL360085.1-201ENST00000604713 532 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 PART1_1.1-201ENST00000611761 217 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 AL162373.1-201ENST00000620433 407 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 AC018692.3-201ENST00000623929 123 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.57□□□□□ -2
NPIPB3Q92617 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.57□□□□□ -2
NPIPB3Q92617 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.57□□□□□ -2
NPIPB3Q92617 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.57□□□□□ -2
NPIPB3Q92617 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.56□□□□□ -2
NPIPB3Q92617 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.56□□□□□ -2
NPIPB3Q92617 RNU1-70P-201ENST00000362618 164 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 SNORA63C-201ENST00000364578 129 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 RNU6-281P-201ENST00000384212 103 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 Y_RNA.455-201ENST00000384230 98 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 RNU6-738P-201ENST00000384531 106 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 Y_RNA.645-201ENST00000391229 102 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.56□□□□□ -2
NPIPB3Q92617 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.56□□□□□ -2
NPIPB3Q92617 AC003685.2-201ENST00000422795 395 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 AC027124.2-201ENST00000428249 105 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 AL445305.1-201ENST00000432577 575 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 MTCO3P8-201ENST00000453691 755 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.56□□□□□ -2
NPIPB3Q92617 SNORA25.14-201ENST00000516481 132 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 SNORA48.11-201ENST00000517015 89 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 RN7SKP40-201ENST00000517211 242 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 AC040926.1-201ENST00000530195 238 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.56□□□□□ -2
NPIPB3Q92617 AC104695.3-201ENST00000604052 296 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 AC019176.2-201ENST00000611579 315 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 TCL6_2.1-201ENST00000615162 119 ntBASIC2.56□□□□□ -2
NPIPB3Q92617 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.56□□□□□ -2
NPIPB3Q92617 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NPIPB3Q92617 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.56□□□□□ -2
NPIPB3Q92617 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NPIPB3Q92617 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.55□□□□□ -2
NPIPB3Q92617 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.55□□□□□ -2
NPIPB3Q92617 RNU6-1301P-201ENST00000362724 104 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms