Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MIR10A-201ENST00000385043 110 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 RNU6-750P-201ENST00000390946 107 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 RNU6-192P-201ENST00000391253 100 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 TIMM9P3-201ENST00000428659 274 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 TPTE2P5-203ENST00000458118 728 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC117503.1-201ENST00000472241 394 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC104576.1-201ENST00000524225 88 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 MIR5000-201ENST00000577717 103 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 MIR4658-201ENST00000584344 65 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 MIR548AC-201ENST00000585049 88 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC005261.5-201ENST00000596280 355 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC017083.3-201ENST00000609955 700 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 U2.17-201ENST00000611454 95 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC098657.3-201ENST00000620434 263 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC007792.1-201ENST00000623023 402 ntBASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.38□□□□□ -2.19
SHROOM3Q8TF72 MTND5P30-201ENST00000452896 1731 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 SNORD70.1-201ENST00000391007 85 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 MTND3P16-201ENST00000452205 344 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 RNU7-66P-201ENST00000459469 62 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 RPL30P12-201ENST00000474666 353 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 AC091435.1-201ENST00000505442 584 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 RNU6-1069P-201ENST00000516612 133 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 MTND1P35-201ENST00000526739 508 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 AC006199.1-201ENST00000548728 219 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 MIR5571-201ENST00000577998 113 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 AC007229.1-201ENST00000590455 412 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 AC002044.1-201ENST00000606707 158 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 RMST_4.1-201ENST00000616886 107 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 AC005609.4-201ENST00000625071 447 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 Z75746.1-201ENST00000440243 2080 ntBASIC1.37□□□□□ -2.19
SHROOM3Q8TF72 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNU6-1120P-201ENST00000362988 108 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNU6-82P-201ENST00000363970 107 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNU6-1317P-201ENST00000364582 104 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 SNORD115-7-201ENST00000365306 82 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 Y_RNA.378-201ENST00000365652 113 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 MIR301A-201ENST00000385261 86 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNU6-1106P-201ENST00000390845 107 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 SRIP3-201ENST00000413200 219 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 SEPT14P3-201ENST00000439401 183 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 MTND1P1-201ENST00000445453 368 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AL732372.2-207ENST00000445840 183 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 SEPT14P2-201ENST00000453405 183 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AL441985.1-201ENST00000457727 251 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC087343.1-201ENST00000477341 475 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 SEPT14P4-201ENST00000513445 186 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 Y_RNA.682-201ENST00000516457 100 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 FO082796.1-201ENST00000523795 183 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC090115.3-201ENST00000553218 849 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNU6-89P-201ENST00000606519 100 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AP001596.2-201ENST00000608410 312 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 MIR6134-201ENST00000617606 109 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC026585.1-201ENST00000619582 524 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 SDR42E1P4-201ENST00000620894 481 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 OR4G2P-201ENST00000328113 903 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNU6-1085P-201ENST00000363576 107 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNU6-1090P-201ENST00000364065 94 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 U3.13-201ENST00000364804 214 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNA5SP240-201ENST00000365355 128 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 Y_RNA.409-201ENST00000383990 98 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNU6-74P-201ENST00000384235 107 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 Y_RNA.516-201ENST00000384541 124 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNU6-220P-201ENST00000390919 107 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 ZNF885P-201ENST00000420174 1098 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AL353193.1-201ENST00000421444 268 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNA5SP233-201ENST00000459153 113 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNU7-138P-201ENST00000459479 64 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RPS3AP17-201ENST00000472594 777 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 AC023141.11-201ENST00000508864 202 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNU6-720P-201ENST00000516363 108 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RNU6-506P-201ENST00000516553 94 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 RN7SKP49-201ENST00000516675 260 ntBASIC1.36□□□□□ -2.19
SHROOM3Q8TF72 SNORD60.2-201ENST00000516883 86 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms