Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.82□□□□□ -1.8
PHC3Q8NDX5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PHC3Q8NDX5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PHC3Q8NDX5 MIR410-201ENST00000362222 80 ntBASIC3.81□□□□□ -1.8
PHC3Q8NDX5 Y_RNA.40-201ENST00000362645 93 ntBASIC3.81□□□□□ -1.8
PHC3Q8NDX5 RNU6-655P-201ENST00000362858 107 ntBASIC3.81□□□□□ -1.8
PHC3Q8NDX5 MIR186-201ENST00000384988 86 ntBASIC3.81□□□□□ -1.8
PHC3Q8NDX5 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PHC3Q8NDX5 SUMO1P2-201ENST00000452524 304 ntBASIC3.81□□□□□ -1.8
PHC3Q8NDX5 AC005042.3-201ENST00000453230 174 ntBASIC3.81□□□□□ -1.8
PHC3Q8NDX5 AC091179.3-201ENST00000474761 144 ntBASIC3.81□□□□□ -1.8
PHC3Q8NDX5 AC103975.1-201ENST00000482506 483 ntBASIC3.81□□□□□ -1.8
PHC3Q8NDX5 AC026726.1-201ENST00000512859 601 ntBASIC3.81□□□□□ -1.8
PHC3Q8NDX5 AL137843.1-201ENST00000605078 385 ntBASIC3.81□□□□□ -1.8
PHC3Q8NDX5 AC022441.3-201ENST00000605737 136 ntBASIC3.81□□□□□ -1.8
PHC3Q8NDX5 PCGEM1.1-201ENST00000613431 131 ntBASIC3.81□□□□□ -1.8
PHC3Q8NDX5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.81□□□□□ -1.8
PHC3Q8NDX5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PHC3Q8NDX5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.81□□□□□ -1.8
PHC3Q8NDX5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PHC3Q8NDX5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PHC3Q8NDX5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHC3Q8NDX5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PHC3Q8NDX5 RNA5SP197-201ENST00000363357 119 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 RNU6-1210P-201ENST00000363775 107 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 Y_RNA.199-201ENST00000364014 102 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 RNU6-1310P-201ENST00000384153 107 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 Y_RNA.555-201ENST00000384673 110 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 MIR30B-201ENST00000384850 88 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 MIR549A-201ENST00000385268 96 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 Y_RNA.793-201ENST00000411222 111 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 AIMP1P2-201ENST00000425294 312 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 IFNA11P-201ENST00000446352 526 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.8□□□□□ -1.8
PHC3Q8NDX5 RPL7P49-201ENST00000471402 708 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 RPL36AP48-201ENST00000485521 314 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 RN7SL323P-201ENST00000494712 295 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 EIF4A1P12-201ENST00000551910 141 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.8□□□□□ -1.8
PHC3Q8NDX5 MIR4643-201ENST00000577473 78 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.8□□□□□ -1.8
PHC3Q8NDX5 RNU1-30P-201ENST00000606575 163 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 AC004792.1-201ENST00000614523 137 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 AL590240.4-201ENST00000616908 390 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 AL354798.1-201ENST00000622505 329 ntBASIC3.8□□□□□ -1.8
PHC3Q8NDX5 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
PHC3Q8NDX5 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.8□□□□□ -1.8
PHC3Q8NDX5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
PHC3Q8NDX5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PHC3Q8NDX5 AL161912.2-201ENST00000565707 3007 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PHC3Q8NDX5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PHC3Q8NDX5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.79□□□□□ -1.8
PHC3Q8NDX5 Y_RNA.136-201ENST00000363444 102 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 Y_RNA.270-201ENST00000364693 104 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 Y_RNA.383-201ENST00000383855 97 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 RNU6-1062P-201ENST00000383908 107 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 RNU6-378P-201ENST00000384324 107 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 RNU1-57P-201ENST00000384491 166 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 SNORA3.3-201ENST00000408712 125 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.79□□□□□ -1.8
PHC3Q8NDX5 AL365496.1-201ENST00000426885 215 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 RAB28P5-201ENST00000427490 651 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 AC112771.1-201ENST00000463581 102 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 Y_RNA.679-201ENST00000516416 91 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 AC022695.1-201ENST00000522089 237 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.79□□□□□ -1.8
PHC3Q8NDX5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.79□□□□□ -1.8
PHC3Q8NDX5 KLKP1-201ENST00000595979 403 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 FTX_2.1-201ENST00000618816 94 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PHC3Q8NDX5 AC103988.1-201ENST00000566382 2177 ntBASIC3.79□□□□□ -1.8
PHC3Q8NDX5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PHC3Q8NDX5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.79□□□□□ -1.8
PHC3Q8NDX5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.78□□□□□ -1.8
PHC3Q8NDX5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PHC3Q8NDX5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
PHC3Q8NDX5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PHC3Q8NDX5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.78□□□□□ -1.8
PHC3Q8NDX5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PHC3Q8NDX5 RNU6-727P-201ENST00000363592 107 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 U3.9-201ENST00000363823 204 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 RNU6-740P-201ENST00000364734 105 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PHC3Q8NDX5 RNA5SP354-201ENST00000391247 136 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 Y_RNA.590-201ENST00000410140 107 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 RNA5SP201-201ENST00000410316 124 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.78□□□□□ -1.8
PHC3Q8NDX5 MTCO1P5-201ENST00000433573 344 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 SUMO1P3-201ENST00000439961 304 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 RPS3P1-201ENST00000456781 192 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 AL121594.1-201ENST00000475906 575 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 AC006483.1-201ENST00000487308 313 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 AC026241.1-201ENST00000517873 2142 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 MIR5685-201ENST00000579080 79 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 AL512605.2-201ENST00000592972 256 ntBASIC3.78□□□□□ -1.8
PHC3Q8NDX5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.78□□□□□ -1.8
PHC3Q8NDX5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms