Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AP001893.2-201ENST00000526949 202 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 ZNF519P3-201ENST00000557158 1032 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 SNORA59B-202ENST00000578183 701 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 MIR4653-201ENST00000585107 83 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 MIR4781-201ENST00000585250 76 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 AC008521.1-201ENST00000587471 187 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 AL157392.4-201ENST00000609756 345 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 Z69720.2-201ENST00000624755 279 ntBASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.66□□□□□ -2.3
ZNF439Q8NDP4 AL159152.1-201ENST00000635019 2587 ntBASIC0.65□□□□□ -2.3
ZNF439Q8NDP4 AC008163.1-202ENST00000636004 2889 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 MIR96-201ENST00000362288 78 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 Y_RNA.18-201ENST00000362461 102 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 SNORD31B-201ENST00000364977 69 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 SNORA18.2-201ENST00000383865 132 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 C1DP2-201ENST00000418167 426 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 AC007283.2-201ENST00000424739 197 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 MTCO3P29-201ENST00000432119 779 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 AC243964.1-201ENST00000441814 261 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 MTND1P18-201ENST00000448191 573 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 snoU109.3-201ENST00000459477 145 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 MTND4LP18-201ENST00000526864 291 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 AC109446.1-201ENST00000566172 220 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 AP005136.1-201ENST00000579765 429 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 BNIP3P8-201ENST00000597863 560 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 AC110760.3-201ENST00000598794 467 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 AC012507.3-201ENST00000603556 477 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 AL359999.1-201ENST00000604513 294 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 RPL17P51-201ENST00000605218 238 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 RNU4-5P-201ENST00000607255 135 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 AC083806.3-201ENST00000614016 455 ntBASIC0.65□□□□□ -2.31
ZNF439Q8NDP4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 RNU6-660P-201ENST00000364566 109 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 RNU6-61P-201ENST00000365528 109 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 MIR515-2-201ENST00000384883 83 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 MIR515-1-201ENST00000384884 83 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 RNU2-3P-201ENST00000410144 191 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 RNA5SP201-201ENST00000410316 124 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 HMGN1P14-201ENST00000412459 517 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 AC078809.1-201ENST00000427601 140 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 AC000111.3-201ENST00000433478 193 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 AC007395.1-201ENST00000451333 677 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 MTATP6P14-201ENST00000455189 673 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 AC016925.1-201ENST00000458303 298 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 snoU13.27-201ENST00000459278 104 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 AC010587.1-201ENST00000505809 469 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 MTND3P25-201ENST00000509243 135 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 AF131216.2-201ENST00000512316 564 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 RNU6-685P-201ENST00000517088 95 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 AP003181.2-201ENST00000528941 181 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 MIR3664-201ENST00000579074 99 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 MIR3923-201ENST00000579521 83 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 BNIP3P16-201ENST00000589779 534 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 AL356157.2-201ENST00000605122 111 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 AC104010.1-201ENST00000616889 150 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 AL607023.1-201ENST00000620045 248 ntBASIC0.64□□□□□ -2.31
ZNF439Q8NDP4 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 MTND4P14-201ENST00000435799 1354 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 U3.9-201ENST00000363823 204 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 RNU1-96P-201ENST00000364163 162 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 RNU6-43P-201ENST00000384302 107 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 RNU6-83P-201ENST00000384568 112 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 MIR122-201ENST00000385044 85 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 MTCYBP36-201ENST00000404146 440 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AL117342.1-201ENST00000404861 406 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AL590135.1-201ENST00000422215 156 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC019205.3-201ENST00000424573 156 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 ISCA1P6-201ENST00000427740 390 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC244670.1-201ENST00000436879 112 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC016700.2-201ENST00000446011 156 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC010531.2-201ENST00000465012 153 ntBASIC0.63□□□□□ -2.31
ZNF439Q8NDP4 AC015911.1-201ENST00000495111 156 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms