Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AL441985.1-201ENST00000457727 251 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AC007215.1-201ENST00000464893 276 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AIG1P1-201ENST00000503376 148 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 RNA5SP164-201ENST00000516533 110 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 RNU6-789P-201ENST00000517105 102 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 RNA5SP179-201ENST00000517284 121 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AC087441.2-201ENST00000529141 262 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AC233702.2-202ENST00000562547 291 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AC091152.3-201ENST00000604227 325 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 MZT1P2-201ENST00000604387 248 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AL162713.1-201ENST00000604480 262 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AC099778.2-201ENST00000610904 211 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AL590240.4-201ENST00000616908 390 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DTX3Q8N9I9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DTX3Q8N9I9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.29□□□□□ -1.88
DTX3Q8N9I9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DTX3Q8N9I9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RNA5SP295-201ENST00000362655 121 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RNU6-774P-201ENST00000363238 107 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RNA5SP197-201ENST00000363357 119 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RNU6-1020P-201ENST00000363684 107 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RNU6-245P-201ENST00000384020 107 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RNU6-198P-201ENST00000384258 104 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 U3.26-201ENST00000391236 204 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 MIR320B2-201ENST00000408479 138 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RNU2-49P-201ENST00000410666 184 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 SNORA57.3-201ENST00000411095 141 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 CYCSP48-201ENST00000417124 323 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AC245291.1-201ENST00000419501 328 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 NDUFB1P1-201ENST00000435191 180 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 SNORA71B-202ENST00000439232 272 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AL714022.1-201ENST00000439897 151 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AC005042.3-201ENST00000453230 174 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AC010099.1-201ENST00000455434 375 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RAC1P2-201ENST00000511164 579 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AC074133.1-201ENST00000515696 183 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RNU6-406P-201ENST00000516470 107 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 SNORA27.4-201ENST00000516650 95 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AC018448.1-201ENST00000552843 316 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RPL21P9-201ENST00000556149 474 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.29□□□□□ -1.88
DTX3Q8N9I9 MIR4425-201ENST00000580572 84 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AL356575.1-201ENST00000603008 283 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AL606490.9-201ENST00000603331 271 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AC022441.3-201ENST00000605737 136 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DTX3Q8N9I9 RNA5SP196-201ENST00000625967 102 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 BX322639.1-202ENST00000423987 2213 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AL109809.4-201ENST00000603520 2185 ntBASIC3.29□□□□□ -1.88
DTX3Q8N9I9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.29□□□□□ -1.88
DTX3Q8N9I9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DTX3Q8N9I9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
DTX3Q8N9I9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
DTX3Q8N9I9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.28□□□□□ -1.88
DTX3Q8N9I9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
DTX3Q8N9I9 AC058791.1-201ENST00000608412 3198 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 UBE2WP1-201ENST00000362030 340 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.82-201ENST00000363000 102 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.92-201ENST00000363043 102 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.235-201ENST00000364412 102 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 RNA5SP97-201ENST00000365006 84 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.306-201ENST00000365015 102 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.312-201ENST00000365089 102 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.322-201ENST00000365151 102 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 RNU6-213P-201ENST00000384051 104 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 RNU6-746P-201ENST00000384112 109 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 RNU6-1289P-201ENST00000384431 106 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.498-201ENST00000384460 102 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 AL512633.1-201ENST00000399931 655 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 RN7SKP27-201ENST00000410684 333 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 RPL19P1-201ENST00000411635 428 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 COX6CP10-201ENST00000416832 224 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.28□□□□□ -1.88
DTX3Q8N9I9 AL117339.2-201ENST00000430475 180 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.650-201ENST00000459002 102 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.638-201ENST00000459374 113 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.28□□□□□ -1.88
DTX3Q8N9I9 AC091179.3-201ENST00000474761 144 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 RNU5F-2P-201ENST00000516066 82 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.777-201ENST00000516982 102 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.28□□□□□ -1.88
DTX3Q8N9I9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.28□□□□□ -1.88
DTX3Q8N9I9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.28□□□□□ -1.88
DTX3Q8N9I9 MIR3923-201ENST00000579521 83 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.771-201ENST00000598668 102 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 AC068831.7-201ENST00000616954 363 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.789-201ENST00000622480 102 ntBASIC3.28□□□□□ -1.88
DTX3Q8N9I9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
DTX3Q8N9I9 AC099654.7-201ENST00000635788 2127 ntBASIC3.28□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms