Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
ARHGEF39Q8N4T4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ARHGEF39Q8N4T4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
ARHGEF39Q8N4T4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 RNU4-15P-201ENST00000362613 141 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 Y_RNA.76-201ENST00000362931 109 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 Y_RNA.446-201ENST00000384178 104 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 SNORA46.1-201ENST00000391069 153 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 RNA5SP475-201ENST00000410568 110 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 Y_RNA.793-201ENST00000411222 111 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 RAB28P5-201ENST00000427490 651 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 AC027124.2-201ENST00000428249 105 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 CYCSP4-201ENST00000429682 331 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 HMGN2P31-201ENST00000432430 273 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 GOT2P5-201ENST00000433995 546 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 RPL23AP3-201ENST00000453844 468 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 RPS3P1-201ENST00000456781 192 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 AL121594.1-201ENST00000475906 575 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 RPL23AP70-201ENST00000483361 460 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 RNA5SP143-201ENST00000516936 115 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 AC079598.5-201ENST00000547460 117 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 AL512605.2-201ENST00000592972 256 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 SNORA51-201ENST00000606420 132 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 AL590240.4-201ENST00000616908 390 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 AC009093.8-201ENST00000641769 292 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 FAM35DP-201ENST00000323387 2712 ntBASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ARHGEF39Q8N4T4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 SNORD9-201ENST00000362566 104 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 RNA5SP197-201ENST00000363357 119 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 Y_RNA.270-201ENST00000364693 104 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 RNU6-1062P-201ENST00000383908 107 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 Y_RNA.590-201ENST00000410140 107 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 ELOCP21-201ENST00000412558 336 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 MRPS10P1-201ENST00000448483 130 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 Y_RNA.644-201ENST00000459006 113 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AC106707.2-201ENST00000484182 374 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AC091959.1-201ENST00000495857 238 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 Y_RNA.674-201ENST00000516362 113 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 RNU6-107P-201ENST00000516643 102 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AC055872.1-201ENST00000570978 278 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 MIR4429-201ENST00000580105 73 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AL365434.2-201ENST00000607979 234 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AC005562.2-201ENST00000618264 111 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AC092593.1-201ENST00000515413 1815 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AC026241.1-201ENST00000517873 2142 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 AL356274.2-201ENST00000624379 3752 ntBASIC3.46□□□□□ -1.86
ARHGEF39Q8N4T4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 MFSD8-236ENST00000641509 4050 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 Y_RNA.136-201ENST00000363444 102 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 Y_RNA.555-201ENST00000384673 110 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 SNORA48.7-201ENST00000391302 135 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 RNU2-61P-201ENST00000411069 191 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 RPL19P1-201ENST00000411635 428 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 AC097463.2-201ENST00000421074 142 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 Z98742.2-201ENST00000431564 187 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 MTCO1P5-201ENST00000433573 344 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 SUMO1P3-201ENST00000439961 304 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 AC004386.2-201ENST00000441858 148 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 RPS27P26-201ENST00000494583 239 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 SNORA70.14-201ENST00000516205 110 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 SNORA27.4-201ENST00000516650 95 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 HSPE1P18-201ENST00000517602 280 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 AC011471.1-201ENST00000585766 187 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 TCL6_2.1-201ENST00000615162 119 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 FTX_2.1-201ENST00000618816 94 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 AC244205.2-202ENST00000635781 342 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 AL034408.1-202ENST00000636088 415 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 MIR3674-201ENST00000636576 68 ntBASIC3.45□□□□□ -1.86
ARHGEF39Q8N4T4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms