Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SLC44A3Q8N4M1 MTND5P6-201ENST00000422338 1798 ntBASIC3.17□□□□□ -1.9
SLC44A3Q8N4M1 FAM35BP-202ENST00000497389 3337 ntBASIC3.17□□□□□ -1.9
SLC44A3Q8N4M1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SLC44A3Q8N4M1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 MIR335-201ENST00000362173 94 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 U3.13-201ENST00000364804 214 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 Y_RNA.416-201ENST00000384014 113 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 SNORD58.1-201ENST00000391313 66 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 RNA5SP184-201ENST00000411071 108 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 AL590135.1-201ENST00000422215 156 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 OOSP1P1-201ENST00000423265 274 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 RPL21P66-201ENST00000426566 466 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 RN7SL442P-201ENST00000473804 320 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 HMGB3P17-201ENST00000504195 649 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 ANXA2P1-201ENST00000505539 926 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 SYF2P1-201ENST00000550658 413 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 MIR4319-201ENST00000577285 85 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 MIR4782-201ENST00000577987 79 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 MIR4300-201ENST00000581016 96 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 AL355877.2-201ENST00000603670 358 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 U6.99-201ENST00000637524 83 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 AC241585.2-209ENST00000638217 143 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 AC022336.2-201ENST00000568966 2538 ntBASIC3.16□□□□□ -1.9
SLC44A3Q8N4M1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
SLC44A3Q8N4M1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 MRPL35P1-201ENST00000404272 572 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 RNU2-14P-201ENST00000411053 191 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 AL512844.2-201ENST00000433990 593 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 AC105272.1-201ENST00000438604 198 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 AC021205.2-201ENST00000480069 347 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 RPS23P5-201ENST00000495419 428 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 AC083906.5-201ENST00000503722 328 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 RNU6-138P-201ENST00000515952 107 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 RNU6-1282P-201ENST00000516735 96 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 Y_RNA.706-201ENST00000516933 99 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 MIR2355-201ENST00000517199 87 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 AP004607.1-201ENST00000524456 203 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 MRPS36P4-201ENST00000534436 298 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 AC010900.2-201ENST00000604508 210 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 AL365434.2-201ENST00000607979 234 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 IGHVIII-44-202ENST00000636235 289 ntBASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC44A3Q8N4M1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 RNU4-82P-201ENST00000362443 140 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 Y_RNA.237-201ENST00000364439 102 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 RNU6-200P-201ENST00000364743 107 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 RNU4-9P-201ENST00000364951 139 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 MIR548H3-201ENST00000408771 118 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 VDAC1P3-201ENST00000434069 851 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 AC004383.1-201ENST00000438135 289 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 AL031659.1-201ENST00000447075 539 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 RNU7-175P-201ENST00000515915 61 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 RNU6-1012P-201ENST00000516606 109 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 Y_RNA.713-201ENST00000517013 96 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 RNA5SP380-201ENST00000517190 98 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 AC091144.1-201ENST00000519573 138 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 AC090617.3-201ENST00000573670 475 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 AC073410.2-201ENST00000603240 332 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 AC009779.6-201ENST00000603972 165 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 RPL23AP88-201ENST00000605759 454 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 AC097372.5-201ENST00000623665 376 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 SNORA50A-202ENST00000629536 136 ntBASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.14□□□□□ -1.91
SLC44A3Q8N4M1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 AC007496.3-201ENST00000624987 3443 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 AC062016.1-201ENST00000355719 319 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 RNY1-201ENST00000364228 113 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 RNU6-898P-201ENST00000365627 104 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 RNU6-17P-201ENST00000384245 107 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 RNU6-18P-201ENST00000384527 107 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 Y_RNA.515-201ENST00000384535 112 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 RNA5SP213-201ENST00000391031 106 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 BTF3L4P2-201ENST00000392798 346 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 RPL26P27-201ENST00000414397 437 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 AC243964.1-201ENST00000441814 261 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 snoU13.30-201ENST00000458951 104 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 TOMM22P6-201ENST00000465035 409 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 RPL30P1-201ENST00000488676 339 ntBASIC3.13□□□□□ -1.91
SLC44A3Q8N4M1 AC092185.1-201ENST00000491371 97 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms