Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNA5SP118-201ENST00000410385 109 ntBASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 ZNF885P-201ENST00000420174 1098 ntBASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 AMD1P1-201ENST00000457220 922 ntBASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 RNU6-1037P-201ENST00000459571 107 ntBASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 AC008526.1-201ENST00000509149 338 ntBASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 AC116337.1-201ENST00000509680 687 ntBASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 FAM206BP-201ENST00000510179 541 ntBASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 RNU6-1314P-201ENST00000517139 104 ntBASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 AC121758.2-201ENST00000553271 193 ntBASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 SNORA59B-202ENST00000578183 701 ntBASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 snoU2_19.1-201ENST00000362361 80 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 Y_RNA.157-201ENST00000363638 102 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 Y_RNA.414-201ENST00000384011 101 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 RNU6-43P-201ENST00000384302 107 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 RN7SKP158-201ENST00000410453 326 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 VN1R36P-201ENST00000414936 291 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 AC003685.2-201ENST00000422795 395 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 SNAP23P1-201ENST00000433229 246 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 RPL23AP7-203ENST00000449021 469 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 AL021397.1-201ENST00000451806 248 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 snoU13.23-201ENST00000458863 104 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 RNU7-66P-201ENST00000459469 62 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 AC079804.2-201ENST00000490376 200 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 AC026371.1-201ENST00000551867 419 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 TRAV32-201ENST00000553993 340 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 AC110588.1-201ENST00000559699 137 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 AL355297.2-201ENST00000604792 129 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 MIR6845-201ENST00000613182 61 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 AL161423.1-201ENST00000613700 262 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 AC093913.1-201ENST00000614178 329 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 MTND4P23-201ENST00000447723 1363 ntBASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CCDC60Q8IWA6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 Y_RNA.86-201ENST00000363020 111 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 Y_RNA.248-201ENST00000364501 109 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 RNU6-1317P-201ENST00000364582 104 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 SNORD23.1-201ENST00000408212 104 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 HMGB3P2-201ENST00000411913 584 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 AIMP1P2-201ENST00000425294 312 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 AL513185.2-201ENST00000425543 193 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 MTCO3P18-201ENST00000440206 761 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 CYP2C59P-201ENST00000457790 269 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 snoU13.14-201ENST00000459372 104 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 AC068781.1-201ENST00000488231 618 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 RPL30P1-201ENST00000488676 339 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 AF213884.2-201ENST00000510417 903 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 HSPE1P4-201ENST00000550617 308 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 VN1R107P-201ENST00000601784 209 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 AP001836.1-201ENST00000604675 523 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 AC068944.2-201ENST00000610373 403 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 AL159153.1-201ENST00000619688 317 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 MIR203B-201ENST00000636080 86 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC60Q8IWA6 RNA5SP432-201ENST00000362480 116 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 RNU6-1148P-201ENST00000410992 104 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 UBE2V1P4-201ENST00000425374 344 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 MTND3P9-201ENST00000429526 346 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 AL161788.1-201ENST00000441805 169 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 FTH1P25-201ENST00000447665 469 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 AL353752.1-201ENST00000454946 260 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 AC025033.1-201ENST00000463883 194 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 RPL9P9-202ENST00000466501 579 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 TRBVA-201ENST00000498804 316 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 AC091874.1-201ENST00000511402 339 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 RNU7-193P-201ENST00000516723 65 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 RNU6-256P-201ENST00000516747 97 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 RNU6-295P-201ENST00000516901 104 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 RNU6-612P-201ENST00000516909 102 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 RNU6-586P-201ENST00000517265 104 ntBASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC60Q8IWA6 MIR4524B-201ENST00000581569 115 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms