Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 Y_RNA.272-201ENST00000364696 102 ntBASIC4.39□□□□□ -1.71
TRIM50Q86XT4 SNORD87-201ENST00000364849 89 ntBASIC4.39□□□□□ -1.71
TRIM50Q86XT4 RNU6-1130P-201ENST00000365434 107 ntBASIC4.39□□□□□ -1.71
TRIM50Q86XT4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM50Q86XT4 HLA-N-201ENST00000437516 135 ntBASIC4.39□□□□□ -1.71
TRIM50Q86XT4 RPL31P41-201ENST00000477967 372 ntBASIC4.39□□□□□ -1.71
TRIM50Q86XT4 AC006499.6-201ENST00000511169 607 ntBASIC4.39□□□□□ -1.71
TRIM50Q86XT4 RNU2-12P-201ENST00000517216 168 ntBASIC4.39□□□□□ -1.71
TRIM50Q86XT4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM50Q86XT4 AC009127.3-201ENST00000570531 403 ntBASIC4.39□□□□□ -1.71
TRIM50Q86XT4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.39□□□□□ -1.71
TRIM50Q86XT4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM50Q86XT4 AL133393.1-201ENST00000603277 287 ntBASIC4.39□□□□□ -1.71
TRIM50Q86XT4 RNU6-91P-201ENST00000607774 107 ntBASIC4.39□□□□□ -1.71
TRIM50Q86XT4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM50Q86XT4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM50Q86XT4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
TRIM50Q86XT4 AC010889.1-201ENST00000566193 2666 ntBASIC4.39□□□□□ -1.71
TRIM50Q86XT4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM50Q86XT4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM50Q86XT4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM50Q86XT4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM50Q86XT4 Y_RNA.7-201ENST00000362352 102 ntBASIC4.38□□□□□ -1.71
TRIM50Q86XT4 RNU6-454P-201ENST00000364292 107 ntBASIC4.38□□□□□ -1.71
TRIM50Q86XT4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM50Q86XT4 RNA5SP201-201ENST00000410316 124 ntBASIC4.38□□□□□ -1.71
TRIM50Q86XT4 AC004386.2-201ENST00000441858 148 ntBASIC4.38□□□□□ -1.71
TRIM50Q86XT4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRIM50Q86XT4 AL358232.1-201ENST00000448030 501 ntBASIC4.38□□□□□ -1.71
TRIM50Q86XT4 AC025445.1-201ENST00000502728 300 ntBASIC4.38□□□□□ -1.71
TRIM50Q86XT4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM50Q86XT4 RNU6-436P-201ENST00000516171 114 ntBASIC4.38□□□□□ -1.71
TRIM50Q86XT4 RNU1-117P-201ENST00000517041 158 ntBASIC4.38□□□□□ -1.71
TRIM50Q86XT4 CYCSP30-201ENST00000546447 172 ntBASIC4.38□□□□□ -1.71
TRIM50Q86XT4 AC027176.1-201ENST00000560204 514 ntBASIC4.38□□□□□ -1.71
TRIM50Q86XT4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM50Q86XT4 AC005562.2-201ENST00000618264 111 ntBASIC4.38□□□□□ -1.71
TRIM50Q86XT4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM50Q86XT4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TRIM50Q86XT4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM50Q86XT4 RNU6-1010P-201ENST00000362757 107 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 SNORD74.4-201ENST00000364129 80 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 Y_RNA.238-201ENST00000364441 102 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM50Q86XT4 U1.1-201ENST00000384101 164 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 AL357075.1-201ENST00000404107 726 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 SNORA57.3-201ENST00000411095 141 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 AC004866.1-201ENST00000411748 78 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 Y_RNA.637-201ENST00000459424 114 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 AP002884.2-201ENST00000471647 395 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 SUMO2P18-201ENST00000518873 252 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 AC069240.1-201ENST00000548774 375 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 EIF4A1P12-201ENST00000551910 141 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 MIR5006-201ENST00000583027 110 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 SNORD11B-201ENST00000607707 90 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 MTND1P7-201ENST00000632801 297 ntBASIC4.37□□□□□ -1.71
TRIM50Q86XT4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
TRIM50Q86XT4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM50Q86XT4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TRIM50Q86XT4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM50Q86XT4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM50Q86XT4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
TRIM50Q86XT4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM50Q86XT4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM50Q86XT4 RNU4-15P-201ENST00000362613 141 ntBASIC4.36□□□□□ -1.71
TRIM50Q86XT4 RNU4-17P-201ENST00000365598 141 ntBASIC4.36□□□□□ -1.71
TRIM50Q86XT4 MIR3074-201ENST00000384885 81 ntBASIC4.36□□□□□ -1.71
TRIM50Q86XT4 MIR513A2-201ENST00000385249 127 ntBASIC4.36□□□□□ -1.71
TRIM50Q86XT4 RNU6-763P-201ENST00000390865 106 ntBASIC4.36□□□□□ -1.71
TRIM50Q86XT4 AIMP1P2-201ENST00000425294 312 ntBASIC4.36□□□□□ -1.71
TRIM50Q86XT4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM50Q86XT4 RNU7-23P-201ENST00000459465 62 ntBASIC4.36□□□□□ -1.71
TRIM50Q86XT4 RPL23AP70-201ENST00000483361 460 ntBASIC4.36□□□□□ -1.71
TRIM50Q86XT4 AC145146.1-201ENST00000496370 254 ntBASIC4.36□□□□□ -1.71
TRIM50Q86XT4 AC025554.1-201ENST00000505641 188 ntBASIC4.36□□□□□ -1.71
TRIM50Q86XT4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM50Q86XT4 TCL6_2.1-201ENST00000615162 119 ntBASIC4.36□□□□□ -1.71
TRIM50Q86XT4 AL034408.1-202ENST00000636088 415 ntBASIC4.36□□□□□ -1.71
TRIM50Q86XT4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRIM50Q86XT4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM50Q86XT4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM50Q86XT4 U3.9-201ENST00000363823 204 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 Y_RNA.182-201ENST00000363880 111 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 RNA5SP97-201ENST00000365006 84 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 SNORA18.2-201ENST00000383865 132 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 Y_RNA.412-201ENST00000384001 104 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 MIR186-201ENST00000384988 86 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 MIR1183-201ENST00000408856 89 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 BMS1P22-201ENST00000414726 313 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM50Q86XT4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM50Q86XT4 AC083863.1-201ENST00000438811 231 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM50Q86XT4 U8.19-201ENST00000459095 133 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 snoU13.14-201ENST00000459372 104 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 RN7SL585P-201ENST00000470538 280 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 DEFB131C-201ENST00000528817 165 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.35□□□□□ -1.71
TRIM50Q86XT4 AC012493.2-201ENST00000595083 291 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms