Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU2-38P-201ENST00000410856 79 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 RPL21P38-201ENST00000418090 167 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 AC012306.1-201ENST00000423267 114 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 Z98949.2-201ENST00000440996 144 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 AC010401.1-201ENST00000463867 348 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 AL442067.1-201ENST00000613261 223 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 SDR42E1P4-201ENST00000620894 481 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 AL356274.2-201ENST00000624379 3752 ntBASIC3.82□□□□□ -1.8
RUFY4Q6ZNE9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 RNU6-1010P-201ENST00000362757 107 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 SNORA20.1-201ENST00000364790 130 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 RNU6-281P-201ENST00000384212 103 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 Y_RNA.462-201ENST00000384268 102 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 MIR128-1-201ENST00000384921 82 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 MIR10B-201ENST00000385011 110 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 AL079342.1-201ENST00000401460 267 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 RN7SKP58-201ENST00000411010 305 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 ARL5AP4-201ENST00000430731 512 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 MIR4513-201ENST00000581077 86 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 AC005296.1-201ENST00000616145 209 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 AC010889.1-201ENST00000566193 2666 ntBASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.81□□□□□ -1.8
RUFY4Q6ZNE9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 AP001148.1-201ENST00000624124 2359 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 RNU4-56P-201ENST00000364700 142 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 AC004383.1-201ENST00000438135 289 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 CEACAMP4-201ENST00000457676 421 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 RN7SL594P-201ENST00000470590 287 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 RPL30P12-201ENST00000474666 353 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 SNORA31.21-201ENST00000517180 77 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 AC025281.1-201ENST00000567026 265 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 AC136932.1-201ENST00000574771 208 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 MIR3128-201ENST00000581957 66 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 AC012493.2-201ENST00000595083 291 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 AL356575.1-201ENST00000603008 283 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 MIR8057-201ENST00000620957 69 ntBASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RUFY4Q6ZNE9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 RNU1-75P-201ENST00000347264 129 ntBASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 RNA5SP197-201ENST00000363357 119 ntBASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 Y_RNA.143-201ENST00000363520 106 ntBASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 Y_RNA.581-201ENST00000391017 97 ntBASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 AC009310.1-201ENST00000414414 451 ntBASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 Z75741.1-201ENST00000446793 314 ntBASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 RN7SL504P-201ENST00000494496 287 ntBASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 PHBP14-201ENST00000512887 367 ntBASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 RPS15AP11-201ENST00000594193 385 ntBASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 AL391813.1-201ENST00000603098 260 ntBASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 AP001282.2-201ENST00000616149 309 ntBASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RUFY4Q6ZNE9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 Y_RNA.20-201ENST00000362479 113 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 snoU2_19.2-201ENST00000363024 80 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 Y_RNA.416-201ENST00000384014 113 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 U3.26-201ENST00000391236 204 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 EI24P2-201ENST00000397776 1076 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 SNORD12B-201ENST00000410433 91 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 AL590135.1-201ENST00000422215 156 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 AC019205.3-201ENST00000424573 156 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 MTND4LP30-201ENST00000454092 297 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 snoU13.14-201ENST00000459372 104 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 AC007215.1-201ENST00000464893 276 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 AC098869.1-201ENST00000481627 292 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 AIG1P1-201ENST00000503376 148 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 Y_RNA.680-201ENST00000516441 93 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 CYCSP23-201ENST00000519781 313 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 AP006245.1-201ENST00000522549 120 ntBASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.78□□□□□ -1.8
RUFY4Q6ZNE9 AC012433.1-201ENST00000588916 398 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms