| CRTC3 | Q6UUV7 | CEP170P1-201 | ENST00000502249 | 4587 nt | BASIC | 3.62 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | SULT1B1-201 | ENST00000310613 | 7115 nt | APPRIS P1 TSL 1 (best) BASIC | 3.62 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | CEP170-202 | ENST00000366542 | 6828 nt | APPRIS P1 TSL 5 BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | NDST3-201 | ENST00000296499 | 5961 nt | APPRIS P1 TSL 1 (best) BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | ADAT2-203 | ENST00000606514 | 6651 nt | TSL 1 (best) BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | WHAMMP2-201 | ENST00000512149 | 5482 nt | TSL 5 BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RAB3C-201 | ENST00000282878 | 8896 nt | APPRIS P1 TSL 1 (best) BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RNU6-682P-201 | ENST00000363843 | 106 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | TRAJ59-201 | ENST00000390480 | 54 nt | APPRIS P1 BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | EI24P2-201 | ENST00000397776 | 1076 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AP003025.1-201 | ENST00000421650 | 149 nt | TSL 1 (best) BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | NDUFB1P1-201 | ENST00000435191 | 180 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | LINC02238-202 | ENST00000436262 | 320 nt | TSL 3 BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RPS15AP5-201 | ENST00000436276 | 388 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AL592309.2-201 | ENST00000444647 | 607 nt | TSL 5 BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | MRPS10P1-201 | ENST00000448483 | 130 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | MIR1302-2HG-201 | ENST00000469289 | 535 nt | TSL 5 BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AC107626.1-201 | ENST00000471084 | 183 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RN7SKP18-201 | ENST00000516005 | 275 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AC027288.1-203 | ENST00000552167 | 567 nt | TSL 4 BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AC091152.3-201 | ENST00000604227 | 325 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AC022441.3-201 | ENST00000605737 | 136 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AC005520.5-201 | ENST00000613926 | 164 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | SNORD98-201 | ENST00000636377 | 67 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | LINC00890-202 | ENST00000569275 | 4595 nt | APPRIS P1 TSL 1 (best) BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | MTND5P35-201 | ENST00000557537 | 1720 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RXFP1-205 | ENST00000448688 | 3861 nt | TSL 1 (best) BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | ZNF99-202 | ENST00000596209 | 7817 nt | TSL 5 BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | LRFN5-204 | ENST00000554171 | 4253 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.61 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | ZNF204P-201 | ENST00000416749 | 2397 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RNU6-799P-201 | ENST00000363567 | 107 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RNU6-1020P-201 | ENST00000363684 | 107 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | Y_RNA.383-201 | ENST00000383855 | 97 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | MIR184-201 | ENST00000384962 | 84 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | SETP5-201 | ENST00000437270 | 562 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AL714022.1-201 | ENST00000439897 | 151 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RPS29P31-201 | ENST00000446147 | 164 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | UQCRBP2-201 | ENST00000447827 | 297 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | IFT74-AS1-201 | ENST00000456198 | 405 nt | TSL 2 BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | SNORD2.1-201 | ENST00000458762 | 69 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RNU6-625P-201 | ENST00000459412 | 107 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RPL7P47-201 | ENST00000497299 | 556 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | Y_RNA.679-201 | ENST00000516416 | 91 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | SNORA27.4-201 | ENST00000516650 | 95 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AC026403.1-201 | ENST00000518938 | 295 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AC072026.1-201 | ENST00000605023 | 201 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RNU6-91P-201 | ENST00000607774 | 107 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | CCDC178-205 | ENST00000406524 | 3039 nt | APPRIS ALT2 TSL 5 BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | MUC7-202 | ENST00000413702 | 2540 nt | APPRIS P2 TSL 4 BASIC | 3.6 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | IL33-201 | ENST00000381434 | 2641 nt | APPRIS P1 TSL 1 (best) BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | EVI2A-201 | ENST00000247270 | 1860 nt | APPRIS P3 TSL 2 BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | Y_RNA.179-201 | ENST00000363844 | 90 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RNU4-56P-201 | ENST00000364700 | 142 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RNU6-793P-201 | ENST00000384233 | 104 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RNU6-651P-201 | ENST00000411040 | 105 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RPL19P1-201 | ENST00000411635 | 428 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AC023141.4-201 | ENST00000412031 | 328 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | ATP5A1P2-201 | ENST00000412323 | 255 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | COX6CP10-201 | ENST00000416832 | 224 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AC004870.4-201 | ENST00000424359 | 360 nt | TSL 2 BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | SMG7-AS1-202 | ENST00000432837 | 466 nt | TSL 3 BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RPL23AP3-201 | ENST00000453844 | 468 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | Y_RNA.638-201 | ENST00000459374 | 113 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | AIG1P1-201 | ENST00000503376 | 148 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | RN7SKP209-201 | ENST00000516888 | 304 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | MIR92B-201 | ENST00000607575 | 96 nt | BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | TLR10-206 | ENST00000508334 | 2616 nt | APPRIS P1 TSL 1 (best) BASIC | 3.59 | □□□□□ -1.83 | | |
| CRTC3 | Q6UUV7 | IL23R-205 | ENST00000637002 | 2208 nt | TSL 1 (best) BASIC | 3.59 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | PSMA5-201 | ENST00000271308 | 3729 nt | APPRIS P1 TSL 1 (best) BASIC | 3.59 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | QSER1-204 | ENST00000527788 | 5052 nt | TSL 2 BASIC | 3.59 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | AC010680.1-201 | ENST00000590024 | 3590 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | AC099654.7-201 | ENST00000635788 | 2127 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | DEFB131A-201 | ENST00000334879 | 213 nt | APPRIS P1 TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | SNORD9-201 | ENST00000362566 | 104 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | RNU6-1289P-201 | ENST00000384431 | 106 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | RNU6-19P-201 | ENST00000384718 | 107 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | RNU6-1140P-201 | ENST00000410517 | 106 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | RPS29P4-201 | ENST00000414733 | 161 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | AP002884.2-201 | ENST00000471647 | 395 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | AC091179.3-201 | ENST00000474761 | 144 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | SNORA70.18-201 | ENST00000516696 | 98 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | Y_RNA.703-201 | ENST00000516846 | 111 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | RNU6-255P-201 | ENST00000516957 | 105 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | AC087441.2-201 | ENST00000529141 | 262 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | AC023442.3-201 | ENST00000532199 | 495 nt | TSL 2 BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | AC018448.1-201 | ENST00000552843 | 316 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | AC105137.2-201 | ENST00000569073 | 466 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | AC055872.1-201 | ENST00000570978 | 278 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | MZT1P2-201 | ENST00000604387 | 248 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | RMST_8.1-201 | ENST00000610287 | 165 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | AL138880.2-201 | ENST00000616214 | 239 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | CT45A5-202 | ENST00000617203 | 726 nt | APPRIS P1 TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | U2.22-201 | ENST00000636441 | 106 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | FOXP2-227 | ENST00000638397 | 240 nt | TSL 5 BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | AC135776.4-201 | ENST00000624300 | 1904 nt | BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | OXR1-207 | ENST00000497705 | 2007 nt | TSL 2 BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | TFEC-201 | ENST00000265440 | 6628 nt | TSL 1 (best) BASIC | 3.58 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | IQCH-201 | ENST00000335894 | 4208 nt | APPRIS P1 TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | ERBIN-212 | ENST00000508515 | 4374 nt | TSL 5 BASIC | 3.57 | □□□□□ -1.84 | | |
| CRTC3 | Q6UUV7 | ESCO1-201 | ENST00000269214 | 4523 nt | APPRIS P1 TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |