Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 Y_RNA.637-201ENST00000459424 114 ntBASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 SNORA31.21-201ENST00000517180 77 ntBASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 SUMO2P18-201ENST00000518873 252 ntBASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 MIR548AI-201ENST00000579940 88 ntBASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 MIR378J-201ENST00000611988 109 ntBASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 uc_338.14-201ENST00000613162 166 ntBASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.65□□□□□ -1.83
LRFN4Q6PJG9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 AC069528.2-201ENST00000624849 1991 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 Y_RNA.238-201ENST00000364441 102 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 RNU6-312P-201ENST00000364629 107 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 Y_RNA.272-201ENST00000364696 102 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 SNORD87-201ENST00000364849 89 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 SNORA18.2-201ENST00000383865 132 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 U8.12-201ENST00000384701 133 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 RNU5E-9P-201ENST00000411164 104 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 DEFB131C-201ENST00000528817 165 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 RN7SL600P-201ENST00000581811 299 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 AL713866.2-201ENST00000603579 219 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 ARF4P1-201ENST00000605447 541 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 MIR6810-201ENST00000622701 70 ntBASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LRFN4Q6PJG9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 Y_RNA.23-201ENST00000362496 106 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 RNU6-763P-201ENST00000390865 106 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 RNA5SP252-201ENST00000391131 119 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 AP000567.1-201ENST00000406413 156 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 SNORA3C-201ENST00000408792 125 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 RNU6-710P-201ENST00000410424 105 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 RNA5SP504-201ENST00000410676 117 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 BMS1P22-201ENST00000414726 313 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 AL365496.1-201ENST00000426885 215 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 HMGN2P20-201ENST00000437531 273 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 AC112771.1-201ENST00000463581 102 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 SNORA70.14-201ENST00000516205 110 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 RNU7-143P-201ENST00000516781 65 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 RNU2-44P-201ENST00000516795 194 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 RNU1-117P-201ENST00000517041 158 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 AC079598.5-201ENST00000547460 117 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 MIR3939-201ENST00000582614 106 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 RNU1-30P-201ENST00000606575 163 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 MIR7151-201ENST00000617477 60 ntBASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
LRFN4Q6PJG9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 Y_RNA.75-201ENST00000362927 97 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 SNORD115-30-201ENST00000364117 82 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 SNORA62-201ENST00000365493 153 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 AL031003.1-201ENST00000404229 172 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 RNU2-2P-201ENST00000410396 191 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 MTATP6P29-201ENST00000415057 132 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 AC010618.1-201ENST00000469924 477 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 RPS27AP9-201ENST00000477681 438 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 AC005840.1-201ENST00000498412 377 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 AC136628.3-201ENST00000521868 290 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 RPL17P51-201ENST00000605218 238 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 RNU2-4P-201ENST00000606190 192 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 U2.15-201ENST00000611544 191 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 U2.16-201ENST00000613119 191 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 U2.12-201ENST00000613778 191 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 U2.9-201ENST00000615427 191 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 U2.11-201ENST00000616345 191 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 U2.2-201ENST00000616535 191 ntBASIC3.62□□□□□ -1.83
LRFN4Q6PJG9 U2.3-201ENST00000617785 191 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms