Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 SNORA9.3-201ENST00000516383 129 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 SNORA43.2-201ENST00000516652 128 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 RNU6-1282P-201ENST00000516735 96 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 SNORA31.18-201ENST00000517043 134 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 AL590705.4-201ENST00000532209 134 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 AC104581.2-201ENST00000572227 430 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 MIR3605-201ENST00000583214 100 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 AC002076.2-201ENST00000617362 122 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 AC006111.3-201ENST00000622137 383 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 AC027309.3-201ENST00000623419 351 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 SCARNA4-202ENST00000625402 129 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 MIR6733-201ENST00000635723 61 ntBASIC2.74□□□□□ -1.97
ZNF549Q6P9A3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AL161431.1-201ENST00000618966 4205 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 MIR26A1-201ENST00000362205 77 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.14-201ENST00000362415 103 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.123-201ENST00000363338 102 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.350-201ENST00000365409 98 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.405-201ENST00000383979 100 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.451-201ENST00000384200 100 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.524-201ENST00000384564 100 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.561-201ENST00000384694 100 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 U3.37-201ENST00000408528 213 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AP000275.1-201ENST00000411943 390 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 MTCO3P19-201ENST00000415864 321 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 RPL21P38-201ENST00000418090 167 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AC139712.2-201ENST00000424302 339 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AL512844.2-201ENST00000433990 593 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AC112220.1-201ENST00000434628 355 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 Z82188.1-201ENST00000436709 154 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AL135938.1-201ENST00000443141 297 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 MTATP6P7-201ENST00000453315 681 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 U8.22-201ENST00000459141 133 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 RN7SKP210-201ENST00000459176 261 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AC090525.1-201ENST00000479116 478 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 RNU1-103P-201ENST00000516502 125 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 HSPE1P20-201ENST00000538133 289 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AC079600.2-201ENST00000550076 130 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AMZ2P1-203ENST00000565833 850 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AL390123.1-201ENST00000603216 237 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 AC130454.1-201ENST00000622948 401 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 U6.99-201ENST00000637524 83 ntBASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ZNF549Q6P9A3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.458-201ENST00000384240 102 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.471-201ENST00000384312 102 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 Y_RNA.489-201ENST00000384410 101 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 MIR190B-201ENST00000401119 79 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 NDUFB4P4-201ENST00000404822 243 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 MTCYBP2-201ENST00000407745 171 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 MIR1302-6-201ENST00000408466 90 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 RNA5SP310-201ENST00000459084 116 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 RPS27AP9-201ENST00000477681 438 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 RN7SL297P-201ENST00000483161 293 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 AC067942.3-201ENST00000512025 362 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 MIR4782-201ENST00000577987 79 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 MIR3128-201ENST00000581957 66 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 AC010928.2-201ENST00000588017 287 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ZNF549Q6P9A3 FAM35CP-201ENST00000554755 2470 ntBASIC2.71□□□□□ -1.97
ZNF549Q6P9A3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 OR56A5-201ENST00000340110 738 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 Y_RNA.27-201ENST00000362540 103 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 Y_RNA.60-201ENST00000362831 98 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 Y_RNA.183-201ENST00000363882 113 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 RNU6-898P-201ENST00000365627 104 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 RNU1-73P-201ENST00000383971 164 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 RPL21P75-201ENST00000396599 483 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 RPL21P28-201ENST00000401418 483 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.71□□□□□ -1.98
ZNF549Q6P9A3 RNU6-1077P-201ENST00000410506 102 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms