Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 U2.12-201ENST00000613778 191 ntBASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 U2.9-201ENST00000615427 191 ntBASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 U2.11-201ENST00000616345 191 ntBASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 U2.2-201ENST00000616535 191 ntBASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 U2.3-201ENST00000617785 191 ntBASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 U2.19-201ENST00000618602 191 ntBASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 RNU2-1-201ENST00000618664 191 ntBASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 U2.6-201ENST00000619225 191 ntBASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 U2.5-201ENST00000619465 191 ntBASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 U2.10-201ENST00000620268 191 ntBASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 AC002543.1-201ENST00000299783 1954 ntBASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TTC39BQ5VTQ0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 Y_RNA.329-201ENST00000365209 107 ntBASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 SNORA18.3-201ENST00000384122 132 ntBASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 MIR186-201ENST00000384988 86 ntBASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 CBX3P9-201ENST00000402326 552 ntBASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 AL133475.1-201ENST00000404414 305 ntBASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 AC096649.2-201ENST00000416186 393 ntBASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 AL591419.1-201ENST00000427423 339 ntBASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 RN7SL132P-201ENST00000478131 296 ntBASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 SNORA31.1-201ENST00000515993 133 ntBASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 SNORA31.5-201ENST00000516190 133 ntBASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 AL606490.9-201ENST00000603331 271 ntBASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TTC39BQ5VTQ0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 AC004944.1-201ENST00000517807 3059 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 RNU6-449P-201ENST00000383914 107 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 Y_RNA.412-201ENST00000384001 104 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 Y_RNA.497-201ENST00000384447 98 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 RNU1-89P-201ENST00000384592 164 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 SNORA40.19-201ENST00000390846 128 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 RNU6-1248P-201ENST00000391096 64 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 RNU6-131P-201ENST00000391144 107 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 AC023141.4-201ENST00000412031 328 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 RNU6-436P-201ENST00000516171 114 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 SNORD59.2-201ENST00000516873 68 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 MIR3923-201ENST00000579521 83 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 MIR3609-201ENST00000582661 80 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 AC020914.4-201ENST00000597690 277 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 SNRPGP20-201ENST00000604477 205 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 HSPE1P7-201ENST00000604681 321 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 MIR486-1-201ENST00000612171 68 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 IPO8P1-201ENST00000455509 3109 ntBASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC39BQ5VTQ0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 RNU6-529P-201ENST00000363383 104 ntBASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 RNA5SP322-201ENST00000363617 119 ntBASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 RNU6-312P-201ENST00000364629 107 ntBASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 CYCSP48-201ENST00000417124 323 ntBASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 AC083863.1-201ENST00000438811 231 ntBASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 snoU13.28-201ENST00000459235 104 ntBASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 AC026402.1-201ENST00000513642 170 ntBASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 RNU2-12P-201ENST00000517216 168 ntBASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 RNU6-711P-201ENST00000517255 106 ntBASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 AL162713.1-201ENST00000604480 262 ntBASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 MIR6875-201ENST00000617506 72 ntBASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TTC39BQ5VTQ0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TTC39BQ5VTQ0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 RNU6-454P-201ENST00000364292 107 ntBASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 RNA5SP97-201ENST00000365006 84 ntBASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 Y_RNA.343-201ENST00000365354 112 ntBASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 Y_RNA.400-201ENST00000383963 111 ntBASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 Y_RNA.415-201ENST00000384012 112 ntBASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 RNU6-959P-201ENST00000384671 107 ntBASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 RNU6-763P-201ENST00000390865 106 ntBASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 MIR320B2-201ENST00000408479 138 ntBASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 U3.40-201ENST00000408706 208 ntBASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.08□□□□□ -1.76
TTC39BQ5VTQ0 U8.19-201ENST00000459095 133 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms