Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AL356575.1-201ENST00000603008 283 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 AC040896.1-201ENST00000613819 479 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 AL590808.1-201ENST00000618696 141 ntBASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.89□□□□□ -1.95
TTC39AQ5SRH9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 MTND5P30-201ENST00000452896 1731 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 RNU6-858P-201ENST00000362436 107 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 RNU6-1280P-201ENST00000365211 107 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 U8.8-201ENST00000365399 135 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 SET-203ENST00000372688 801 ntTSL 2 BASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 SNORD116-20-201ENST00000384529 92 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 RNU6-174P-201ENST00000410406 106 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 RNU4-53P-201ENST00000410828 140 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 AC023141.4-201ENST00000412031 328 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 PMCHL1-202ENST00000423102 261 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 RPL31P41-201ENST00000477967 372 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 AL163540.1-201ENST00000485382 386 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 RPL23AP49-201ENST00000492925 468 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 AIG1P1-201ENST00000503376 148 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 AC022493.2-201ENST00000506122 481 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 ACA59.1-201ENST00000515966 143 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 Y_RNA.711-201ENST00000516993 102 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 NACAP3-201ENST00000552100 481 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 SNRPGP18-201ENST00000553000 214 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 AC091544.4-201ENST00000555268 342 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 CYP2C61P-201ENST00000604072 290 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 AC067747.1-201ENST00000608026 250 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 AC110491.1-201ENST00000562191 2010 ntBASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.88□□□□□ -1.95
TTC39AQ5SRH9 CDC27P3-201ENST00000635418 1910 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 Y_RNA.5-201ENST00000362334 102 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 RNU6-1115P-201ENST00000362490 106 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 RNU6-105P-201ENST00000363909 104 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 SNORA25.6-201ENST00000364121 118 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 SNORA22B-201ENST00000383876 138 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 AL353997.1-201ENST00000432936 108 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 AL137792.2-201ENST00000443484 235 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 U8.21-201ENST00000459536 136 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 MRPL42P6-201ENST00000486397 371 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 AC090096.1-201ENST00000489168 390 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 AC116655.1-201ENST00000508324 901 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 SMURF2P1-201ENST00000514992 481 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 RNU6-470P-201ENST00000515954 104 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 RNA5SP281-201ENST00000516504 135 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 RNU6-699P-201ENST00000517081 110 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 AP005902.1-201ENST00000521358 186 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 CBX3P8-201ENST00000532412 525 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 AC006199.1-201ENST00000548728 219 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 MIR4273-201ENST00000582824 84 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 AC060766.3-201ENST00000591442 263 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.87□□□□□ -1.95
TTC39AQ5SRH9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 Y_RNA.463-201ENST00000384271 102 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 Y_RNA.533-201ENST00000384596 114 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 MIR767-201ENST00000390228 109 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 RPS29P13-201ENST00000402041 169 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 RNU2-49P-201ENST00000410666 184 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 OOSP1P1-201ENST00000423265 274 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 RPS15AP5-201ENST00000436276 388 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 Y_RNA.661-201ENST00000516003 99 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 SNORA31.18-201ENST00000517043 134 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 MIR4446-201ENST00000578505 67 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 AC018889.1-201ENST00000605372 397 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 HMGB1P24-202ENST00000615653 685 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 UCA1.1-201ENST00000620952 75 ntBASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.86□□□□□ -1.95
TTC39AQ5SRH9 MIR21-201ENST00000362134 72 ntBASIC2.85□□□□□ -1.95
TTC39AQ5SRH9 SNORD56.1-201ENST00000362913 68 ntBASIC2.85□□□□□ -1.95
TTC39AQ5SRH9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.85□□□□□ -1.95
TTC39AQ5SRH9 Y_RNA.162-201ENST00000363683 102 ntBASIC2.85□□□□□ -1.95
TTC39AQ5SRH9 RNU6-692P-201ENST00000384496 107 ntBASIC2.85□□□□□ -1.95
TTC39AQ5SRH9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TTC39AQ5SRH9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.85□□□□□ -1.95
TTC39AQ5SRH9 RPS15AP7-201ENST00000439294 405 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 283 ms