| CRY2 | Q49AN0 | MIR514A3-201 | ENST00000385132 | 88 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | MIR1294-201 | ENST00000408503 | 142 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | Y_RNA.597-201 | ENST00000410463 | 100 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | EDDM3CP-201 | ENST00000415977 | 425 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AL356277.2-201 | ENST00000421318 | 441 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AL590135.1-201 | ENST00000422215 | 156 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC019205.3-201 | ENST00000424573 | 156 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | Z82205.1-201 | ENST00000428456 | 297 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC016700.2-201 | ENST00000446011 | 156 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | MAMDC2-AS1-205 | ENST00000451488 | 317 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC015911.1-201 | ENST00000495111 | 156 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | HMGB1P35-201 | ENST00000503360 | 598 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC010255.2-201 | ENST00000505209 | 428 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | LINC01256-201 | ENST00000513270 | 508 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | Y_RNA.655-201 | ENST00000515919 | 96 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC108449.1-202 | ENST00000517632 | 478 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | ZNF519P2-201 | ENST00000557032 | 169 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | EIF1P4-201 | ENST00000572664 | 335 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | MIR3136-201 | ENST00000583498 | 78 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | MIR5692C1-201 | ENST00000585309 | 91 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC009314.1-201 | ENST00000603871 | 304 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC084768.2-201 | ENST00000622736 | 221 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | SNORD98-201 | ENST00000636377 | 67 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | IDE-201 | ENST00000265986 | 5877 nt | APPRIS P1 TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RMDN2-203 | ENST00000402091 | 1973 nt | TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | Y_RNA.402-201 | ENST00000383972 | 102 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU6-214P-201 | ENST00000384130 | 107 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | U8.10-201 | ENST00000384260 | 133 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | TRDJ2-201 | ENST00000390475 | 54 nt | APPRIS P1 BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | TRAJ21-201 | ENST00000390516 | 55 nt | APPRIS P1 BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | USP9YP18-201 | ENST00000425912 | 695 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC078809.1-201 | ENST00000427601 | 140 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | SNAP23P1-201 | ENST00000433229 | 246 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC011753.1-201 | ENST00000451001 | 220 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC117394.2-201 | ENST00000487827 | 323 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC083904.1-201 | ENST00000487828 | 231 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU6-667P-201 | ENST00000517186 | 102 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC034114.1-201 | ENST00000520293 | 285 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | MTND1P35-201 | ENST00000526739 | 508 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC109635.3-201 | ENST00000529536 | 185 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC026271.5-201 | ENST00000577873 | 130 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RBBP8-210 | ENST00000581687 | 617 nt | TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC092070.3-201 | ENST00000596041 | 337 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AL034555.1-201 | ENST00000604816 | 211 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | PTP4A2-220 | ENST00000627328 | 615 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | ZNF720P1-201 | ENST00000562403 | 1939 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | MIRLET7G-201 | ENST00000362280 | 84 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | Y_RNA.38-201 | ENST00000362617 | 102 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU6-944P-201 | ENST00000364023 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU6-1215P-201 | ENST00000384441 | 102 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU6-908P-201 | ENST00000410160 | 94 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | BTF3P4-201 | ENST00000418852 | 495 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | MRPS10P2-201 | ENST00000431226 | 381 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AL031659.1-201 | ENST00000447075 | 539 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC016632.1-201 | ENST00000503994 | 196 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC091435.1-201 | ENST00000505442 | 584 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU6-965P-201 | ENST00000516721 | 96 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNA5SP402-201 | ENST00000517148 | 110 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC099554.1-201 | ENST00000520032 | 572 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC104576.1-201 | ENST00000524225 | 88 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC009127.3-201 | ENST00000570531 | 403 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RPS3AP23-202 | ENST00000574601 | 686 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC044840.1-201 | ENST00000577641 | 472 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | MIR4781-201 | ENST00000585250 | 76 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AL049779.4-201 | ENST00000604500 | 156 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AP001836.1-201 | ENST00000604675 | 523 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | Clostridiales-1.2-201 | ENST00000636724 | 160 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | MDM2-206 | ENST00000350057 | 1401 nt | TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AP000560.1-201 | ENST00000624150 | 1937 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | SLC9C2-201 | ENST00000367714 | 4428 nt | APPRIS P1 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | ST7-AS2-206 | ENST00000456577 | 1351 nt | TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | MIR378A-201 | ENST00000362177 | 66 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU6-1090P-201 | ENST00000364065 | 94 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNA5SP160-201 | ENST00000364866 | 120 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | Y_RNA.504-201 | ENST00000384481 | 104 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | BTF3L4P2-201 | ENST00000392798 | 346 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | MIR450B-201 | ENST00000401182 | 78 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU2-20P-201 | ENST00000410425 | 191 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | MTND1P34-201 | ENST00000438556 | 671 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | LINC01549-201 | ENST00000440664 | 714 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AL359672.1-201 | ENST00000442302 | 409 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AL442638.1-201 | ENST00000443359 | 237 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC073325.1-201 | ENST00000443714 | 542 nt | TSL 4 BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC005703.2-201 | ENST00000453339 | 343 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | LINC01198-202 | ENST00000458282 | 558 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC025033.1-201 | ENST00000463883 | 194 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | PLCH1-AS2-201 | ENST00000472913 | 408 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | LINC00971-201 | ENST00000482721 | 535 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC018868.1-201 | ENST00000491307 | 315 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC008628.2-201 | ENST00000502605 | 298 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | SNORA25.15-201 | ENST00000516487 | 89 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | RNU7-193P-201 | ENST00000516723 | 65 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC103853.2-201 | ENST00000519805 | 716 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AP005597.4-201 | ENST00000526762 | 229 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | TMCO5B-203 | ENST00000529623 | 509 nt | TSL 4 BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC022616.8-201 | ENST00000533569 | 253 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC087463.2-201 | ENST00000565943 | 472 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AL031274.2-201 | ENST00000599419 | 203 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC018889.1-201 | ENST00000605372 | 397 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| CRY2 | Q49AN0 | AC139792.2-201 | ENST00000624218 | 587 nt | BASIC | 2.29 | □□□□□ -2.04 | | |