Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SNORA4.4-201ENST00000515921 135 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 AC107953.1-201ENST00000522216 297 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 AL512360.1-201ENST00000555346 234 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 MIR4498-201ENST00000577599 66 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 AC012493.3-201ENST00000604494 112 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 AL670379.2-201ENST00000604983 252 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 Z82243.1-201ENST00000609432 473 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 AL773524.1-201ENST00000614065 229 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 WWP1P1-201ENST00000466609 2769 ntBASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHROOM1Q2M3G4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 AC009487.4-201ENST00000624969 3585 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-1322P-201ENST00000364309 107 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-487P-201ENST00000365430 104 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 RNU4-20P-201ENST00000365601 151 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 Y_RNA.378-201ENST00000365652 113 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 RNU2-40P-201ENST00000410833 196 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 RPL23AP36-201ENST00000413895 458 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 VN1R108P-201ENST00000431580 830 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-261P-201ENST00000459506 102 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 AC027575.1-201ENST00000481064 460 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 AK3P2-201ENST00000507976 429 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 AC107393.1-201ENST00000512403 346 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 RPL39P5-202ENST00000512505 151 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-314P-201ENST00000516574 104 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 RNU6-586P-201ENST00000517265 104 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 AP003034.1-201ENST00000534621 422 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 MIR4419B-201ENST00000577260 68 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 MIR4424-201ENST00000585257 86 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 AL359880.1-201ENST00000621879 266 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 AC007792.1-201ENST00000623023 402 ntBASIC2.03□□□□□ -2.08
SHROOM1Q2M3G4 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 Y_RNA.399-201ENST00000383955 105 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-38P-201ENST00000384085 107 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-483P-201ENST00000384088 108 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-1274P-201ENST00000384557 107 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-1068P-201ENST00000410958 103 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 C8orf59P1-201ENST00000429930 303 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 MTCO2P7-201ENST00000446518 666 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-333P-201ENST00000459117 107 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 AC083798.1-201ENST00000472671 131 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-965P-201ENST00000516721 96 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 HSBP1P1-201ENST00000555205 166 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 MTCO3P23-201ENST00000561363 289 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 AC092747.3-201ENST00000603769 301 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 AC004908.3-201ENST00000610248 625 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 AL121757.2-201ENST00000611223 313 ntBASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
SHROOM1Q2M3G4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-1210P-201ENST00000363775 107 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-944P-201ENST00000364023 107 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 RNA5SP465-201ENST00000391195 109 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-1245P-201ENST00000411130 106 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 RNA5SP450-201ENST00000411206 102 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 MTND3P16-201ENST00000452205 344 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 AL137159.1-201ENST00000452808 512 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 AC112492.4-201ENST00000456549 352 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 Y_RNA.693-201ENST00000516641 110 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-835P-201ENST00000516974 104 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 SNORA44.1-201ENST00000517031 108 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 AC109329.1-201ENST00000518744 317 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 AC090115.3-201ENST00000553218 849 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 AC012557.2-201ENST00000605919 418 ntBASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.01□□□□□ -2.09
SHROOM1Q2M3G4 MTND4P23-201ENST00000447723 1363 ntBASIC2□□□□□ -2.09
SHROOM1Q2M3G4 AC233981.2-201ENST00000611524 1614 ntBASIC2□□□□□ -2.09
SHROOM1Q2M3G4 MIR378A-201ENST00000362177 66 ntBASIC2□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-743P-201ENST00000364151 106 ntBASIC2□□□□□ -2.09
SHROOM1Q2M3G4 MIR518A2-201ENST00000384966 87 ntBASIC2□□□□□ -2.09
SHROOM1Q2M3G4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2□□□□□ -2.09
SHROOM1Q2M3G4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2□□□□□ -2.09
SHROOM1Q2M3G4 MTND1P1-201ENST00000445453 368 ntBASIC2□□□□□ -2.09
SHROOM1Q2M3G4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2□□□□□ -2.09
SHROOM1Q2M3G4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2□□□□□ -2.09
SHROOM1Q2M3G4 HMGB3P17-201ENST00000504195 649 ntBASIC2□□□□□ -2.09
SHROOM1Q2M3G4 CBX3P4-201ENST00000538909 354 ntBASIC2□□□□□ -2.09
SHROOM1Q2M3G4 IMMP1LP2-201ENST00000552954 492 ntBASIC2□□□□□ -2.09
SHROOM1Q2M3G4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2□□□□□ -2.09
SHROOM1Q2M3G4 AL645939.4-201ENST00000604495 135 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms