Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 AL110115.1-201ENST00000614396 364 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 AC004944.1-201ENST00000517807 3059 ntBASIC4.3□□□□□ -1.72
RTN1Q16799 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTN1Q16799 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.3□□□□□ -1.72
RTN1Q16799 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.3□□□□□ -1.72
RTN1Q16799 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RTN1Q16799 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.3□□□□□ -1.72
RTN1Q16799 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RTN1Q16799 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.29□□□□□ -1.72
RTN1Q16799 AC010733.2-201ENST00000589496 5702 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTN1Q16799 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
RTN1Q16799 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTN1Q16799 Y_RNA.182-201ENST00000363880 111 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 RNU6-312P-201ENST00000364629 107 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 Y_RNA.329-201ENST00000365209 107 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 Y_RNA.357-201ENST00000365487 109 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 Y_RNA.400-201ENST00000383963 111 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 SNORD20-201ENST00000384550 80 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.29□□□□□ -1.72
RTN1Q16799 RNA5SP310-201ENST00000459084 116 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 AC107626.1-201ENST00000471084 183 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 RPS27AP9-201ENST00000477681 438 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.29□□□□□ -1.72
RTN1Q16799 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTN1Q16799 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 RN7SKP83-201ENST00000516512 178 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 RNU6-62P-201ENST00000516526 102 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 SUMO2P18-201ENST00000518873 252 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 IGKV2D-19-201ENST00000523346 262 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.29□□□□□ -1.72
RTN1Q16799 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.29□□□□□ -1.72
RTN1Q16799 AC105137.2-201ENST00000569073 466 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 AC009127.3-201ENST00000570531 403 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 HMGN2P15-201ENST00000585707 270 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTN1Q16799 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTN1Q16799 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTN1Q16799 CUL1P1-201ENST00000509510 2425 ntBASIC4.29□□□□□ -1.72
RTN1Q16799 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTN1Q16799 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTN1Q16799 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.28□□□□□ -1.72
RTN1Q16799 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
RTN1Q16799 RNU6-324P-201ENST00000363957 106 ntBASIC4.28□□□□□ -1.72
RTN1Q16799 RNU6-818P-201ENST00000364837 108 ntBASIC4.28□□□□□ -1.72
RTN1Q16799 Y_RNA.412-201ENST00000384001 104 ntBASIC4.28□□□□□ -1.72
RTN1Q16799 RN7SKP177-201ENST00000410567 355 ntBASIC4.28□□□□□ -1.72
RTN1Q16799 AC096649.2-201ENST00000416186 393 ntBASIC4.28□□□□□ -1.72
RTN1Q16799 AC103975.1-201ENST00000482506 483 ntBASIC4.28□□□□□ -1.72
RTN1Q16799 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.28□□□□□ -1.72
RTN1Q16799 RNU6-107P-201ENST00000516643 102 ntBASIC4.28□□□□□ -1.72
RTN1Q16799 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.28□□□□□ -1.72
RTN1Q16799 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.28□□□□□ -1.72
RTN1Q16799 HIGD1AP1-201ENST00000550979 275 ntBASIC4.28□□□□□ -1.72
RTN1Q16799 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.28□□□□□ -1.72
RTN1Q16799 MIR3923-201ENST00000579521 83 ntBASIC4.28□□□□□ -1.72
RTN1Q16799 AL020997.2-201ENST00000602607 184 ntBASIC4.28□□□□□ -1.72
RTN1Q16799 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTN1Q16799 AL391516.1-201ENST00000554380 2449 ntBASIC4.28□□□□□ -1.72
RTN1Q16799 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTN1Q16799 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTN1Q16799 AC007496.3-201ENST00000624987 3443 ntBASIC4.27□□□□□ -1.73
RTN1Q16799 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTN1Q16799 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RTN1Q16799 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.27□□□□□ -1.73
RTN1Q16799 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RTN1Q16799 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTN1Q16799 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTN1Q16799 Y_RNA.23-201ENST00000362496 106 ntBASIC4.27□□□□□ -1.73
RTN1Q16799 RNU6-959P-201ENST00000384671 107 ntBASIC4.27□□□□□ -1.73
RTN1Q16799 RNU6-131P-201ENST00000391144 107 ntBASIC4.27□□□□□ -1.73
RTN1Q16799 AL357075.1-201ENST00000404107 726 ntBASIC4.27□□□□□ -1.73
RTN1Q16799 RN7SKP202-201ENST00000410439 330 ntBASIC4.27□□□□□ -1.73
RTN1Q16799 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.27□□□□□ -1.73
RTN1Q16799 AL162725.1-201ENST00000435405 301 ntBASIC4.27□□□□□ -1.73
RTN1Q16799 SEPT7P4-201ENST00000437076 306 ntBASIC4.27□□□□□ -1.73
RTN1Q16799 RNU2-58P-201ENST00000516403 183 ntBASIC4.27□□□□□ -1.73
RTN1Q16799 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.27□□□□□ -1.73
RTN1Q16799 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.27□□□□□ -1.73
RTN1Q16799 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.27□□□□□ -1.73
RTN1Q16799 AL121772.2-201ENST00000614331 297 ntBASIC4.27□□□□□ -1.73
RTN1Q16799 AL034408.1-202ENST00000636088 415 ntBASIC4.27□□□□□ -1.73
RTN1Q16799 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTN1Q16799 AL672296.1-201ENST00000427780 2158 ntBASIC4.27□□□□□ -1.73
RTN1Q16799 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTN1Q16799 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTN1Q16799 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RTN1Q16799 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTN1Q16799 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.26□□□□□ -1.73
RTN1Q16799 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.26□□□□□ -1.73
RTN1Q16799 Y_RNA.121-201ENST00000363309 113 ntBASIC4.26□□□□□ -1.73
RTN1Q16799 Y_RNA.568-201ENST00000384742 113 ntBASIC4.26□□□□□ -1.73
RTN1Q16799 CBX3P9-201ENST00000402326 552 ntBASIC4.26□□□□□ -1.73
RTN1Q16799 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.26□□□□□ -1.73
RTN1Q16799 AC092017.2-201ENST00000427600 362 ntBASIC4.26□□□□□ -1.73
RTN1Q16799 AL645939.1-201ENST00000453429 797 ntBASIC4.26□□□□□ -1.73
RTN1Q16799 S100A11P1-201ENST00000477525 312 ntBASIC4.26□□□□□ -1.73
RTN1Q16799 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.26□□□□□ -1.73
RTN1Q16799 RNU5F-2P-201ENST00000516066 82 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms