Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.23□□□□□ -1.89
SCAPQ12770 RPL23AP78-201ENST00000599928 470 ntBASIC3.23□□□□□ -1.89
SCAPQ12770 AL355877.2-201ENST00000603670 358 ntBASIC3.23□□□□□ -1.89
SCAPQ12770 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.23□□□□□ -1.89
SCAPQ12770 AC090617.7-201ENST00000623952 126 ntBASIC3.23□□□□□ -1.89
SCAPQ12770 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCAPQ12770 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SCAPQ12770 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCAPQ12770 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.23□□□□□ -1.89
SCAPQ12770 ZNF826P-207ENST00000622273 1910 ntBASIC3.23□□□□□ -1.89
SCAPQ12770 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SCAPQ12770 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SCAPQ12770 Y_RNA.14-201ENST00000362415 103 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 RNU1-105P-201ENST00000363470 161 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 RNU6-105P-201ENST00000363909 104 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 MIR518D-201ENST00000385014 87 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 MT-TW-201ENST00000387382 68 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 ARF4P2-201ENST00000430209 526 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 RPEP5-201ENST00000441137 268 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.22□□□□□ -1.89
SCAPQ12770 AL513124.1-201ENST00000450410 614 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.22□□□□□ -1.89
SCAPQ12770 RNU6-1023P-201ENST00000516137 106 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.22□□□□□ -1.89
SCAPQ12770 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.22□□□□□ -1.89
SCAPQ12770 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 UBL5P2-201ENST00000583788 219 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 AC024153.1-201ENST00000603103 365 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 AC078938.1-201ENST00000620993 318 ntBASIC3.22□□□□□ -1.89
SCAPQ12770 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SCAPQ12770 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCAPQ12770 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.22□□□□□ -1.89
SCAPQ12770 AC091564.4-201ENST00000533934 2194 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 AP000560.1-201ENST00000624150 1937 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 SNORA20.1-201ENST00000364790 130 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 RNU4-9P-201ENST00000364951 139 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 CD24P4-201ENST00000382840 243 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 Y_RNA.405-201ENST00000383979 100 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 Y_RNA.451-201ENST00000384200 100 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 Y_RNA.515-201ENST00000384535 112 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 Y_RNA.524-201ENST00000384564 100 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 Y_RNA.561-201ENST00000384694 100 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 SNORD15B-201ENST00000384714 146 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 RNU6-1245P-201ENST00000411130 106 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 ARL5AP4-201ENST00000430731 512 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 MTCO3P29-201ENST00000432119 779 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 AL591043.1-201ENST00000432461 424 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 RNU7-87P-201ENST00000459343 62 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 TRBVB-201ENST00000477100 408 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 AL049830.2-201ENST00000480072 201 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.21□□□□□ -1.9
SCAPQ12770 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.21□□□□□ -1.9
SCAPQ12770 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.21□□□□□ -1.9
SCAPQ12770 AC006199.1-201ENST00000548728 219 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 AL442163.3-201ENST00000554110 156 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 AC025281.1-201ENST00000567026 265 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.21□□□□□ -1.9
SCAPQ12770 AC141273.2-201ENST00000618989 130 ntBASIC3.21□□□□□ -1.9
SCAPQ12770 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCAPQ12770 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCAPQ12770 AC009541.1-201ENST00000438279 2662 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.2□□□□□ -1.9
SCAPQ12770 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SCAPQ12770 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SCAPQ12770 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.2□□□□□ -1.9
SCAPQ12770 AC233981.2-201ENST00000611524 1614 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 AC073325.2-201ENST00000339545 159 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 RNU6-212P-201ENST00000362642 104 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 RNA5SP139-201ENST00000364340 117 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 RNU6-806P-201ENST00000365147 105 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 Y_RNA.358-201ENST00000365491 99 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 Y_RNA.478-201ENST00000384358 107 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 RNU2-49P-201ENST00000410666 184 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 RNU2-38P-201ENST00000410856 79 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 SDAD1P3-201ENST00000427380 333 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAPQ12770 LINC01399-202ENST00000458450 244 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAPQ12770 AC025465.3-201ENST00000510570 311 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 SNORA43.2-201ENST00000516652 128 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAPQ12770 MIR3162-201ENST00000581818 82 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 MIR3128-201ENST00000581957 66 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 AC096772.1-201ENST00000609146 564 ntBASIC3.2□□□□□ -1.9
SCAPQ12770 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAPQ12770 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCAPQ12770 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.2□□□□□ -1.9
SCAPQ12770 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
SCAPQ12770 Y_RNA.26-201ENST00000362539 101 ntBASIC3.19□□□□□ -1.9
SCAPQ12770 RNU6-1027P-201ENST00000383998 107 ntBASIC3.19□□□□□ -1.9
SCAPQ12770 SNORA54-201ENST00000384281 123 ntBASIC3.19□□□□□ -1.9
SCAPQ12770 Y_RNA.518-201ENST00000384552 113 ntBASIC3.19□□□□□ -1.9
SCAPQ12770 Y_RNA.562-201ENST00000384695 113 ntBASIC3.19□□□□□ -1.9
SCAPQ12770 MIR767-201ENST00000390228 109 ntBASIC3.19□□□□□ -1.9
SCAPQ12770 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SCAPQ12770 RNA5SP354-201ENST00000391247 136 ntBASIC3.19□□□□□ -1.9
SCAPQ12770 RPL21P75-201ENST00000396599 483 ntBASIC3.19□□□□□ -1.9
SCAPQ12770 RPL21P28-201ENST00000401418 483 ntBASIC3.19□□□□□ -1.9
SCAPQ12770 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms