Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.06□□□□□ -2.08
GABPAQ06546 ELOCP5-201ENST00000604924 333 ntBASIC2.06□□□□□ -2.08
GABPAQ06546 AC092807.2-201ENST00000609367 243 ntBASIC2.06□□□□□ -2.08
GABPAQ06546 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.06□□□□□ -2.08
GABPAQ06546 OR4G1P-203ENST00000641984 1631 ntBASIC2.06□□□□□ -2.08
GABPAQ06546 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
GABPAQ06546 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
GABPAQ06546 RNU6-43P-201ENST00000384302 107 ntBASIC2.05□□□□□ -2.08
GABPAQ06546 SNORD116-4-201ENST00000384733 96 ntBASIC2.05□□□□□ -2.08
GABPAQ06546 RNU2-32P-201ENST00000411193 191 ntBASIC2.05□□□□□ -2.08
GABPAQ06546 ARL5AP1-201ENST00000418991 388 ntBASIC2.05□□□□□ -2.08
GABPAQ06546 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.05□□□□□ -2.08
GABPAQ06546 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.05□□□□□ -2.08
GABPAQ06546 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.05□□□□□ -2.08
GABPAQ06546 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.05□□□□□ -2.08
GABPAQ06546 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.05□□□□□ -2.08
GABPAQ06546 AC087854.1-201ENST00000519706 414 ntBASIC2.05□□□□□ -2.08
GABPAQ06546 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.05□□□□□ -2.08
GABPAQ06546 AC025423.5-201ENST00000550230 219 ntBASIC2.05□□□□□ -2.08
GABPAQ06546 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.05□□□□□ -2.08
GABPAQ06546 AC010525.2-201ENST00000590920 195 ntBASIC2.05□□□□□ -2.08
GABPAQ06546 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.05□□□□□ -2.08
GABPAQ06546 VN1R107P-201ENST00000601784 209 ntBASIC2.05□□□□□ -2.08
GABPAQ06546 AC022202.1-201ENST00000613515 211 ntBASIC2.05□□□□□ -2.08
GABPAQ06546 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
GABPAQ06546 Y_RNA.3-201ENST00000362331 103 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 Y_RNA.38-201ENST00000362617 102 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 RNU6-1285P-201ENST00000363480 105 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 RNU6-457P-201ENST00000363999 107 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 Y_RNA.373-201ENST00000365600 103 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 MIR29B2-201ENST00000385055 81 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 SNORD23.1-201ENST00000408212 104 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 U3.40-201ENST00000408706 208 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 RNA5SP270-201ENST00000411361 118 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 AL590556.1-201ENST00000423231 483 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 RPS15AP10-201ENST00000432472 382 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 MTND3P21-201ENST00000433774 331 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 AC244670.1-201ENST00000436879 112 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.04□□□□□ -2.08
GABPAQ06546 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.04□□□□□ -2.08
GABPAQ06546 RNU6-1208P-201ENST00000459588 107 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 AC083904.1-201ENST00000487828 231 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 AC018868.1-201ENST00000491307 315 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 RNA5SP458-201ENST00000516188 119 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 RNU6-720P-201ENST00000516363 108 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 RNU6-1069P-201ENST00000516612 133 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.04□□□□□ -2.08
GABPAQ06546 AC016957.1-201ENST00000534895 309 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 CBX3P4-201ENST00000538909 354 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.04□□□□□ -2.08
GABPAQ06546 HSPE1P4-201ENST00000550617 308 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.04□□□□□ -2.08
GABPAQ06546 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.04□□□□□ -2.08
GABPAQ06546 MIR3935-201ENST00000583472 104 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 RNU6-89P-201ENST00000606519 100 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 AC064807.4-201ENST00000607201 407 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
GABPAQ06546 DISC2.1-201ENST00000612827 205 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
GABPAQ06546 MIR1321-201ENST00000637766 79 ntBASIC2.04□□□□□ -2.08
GABPAQ06546 RNU6-944P-201ENST00000364023 107 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 RNU6-1090P-201ENST00000364065 94 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 Y_RNA.231-201ENST00000364358 102 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 RNU6-1141P-201ENST00000364520 107 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 RNU6-546P-201ENST00000383991 107 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 Y_RNA.554-201ENST00000384672 102 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 MIR514A2-201ENST00000385131 88 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 MIR514A3-201ENST00000385132 88 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 RNU6-908P-201ENST00000410160 94 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 Y_RNA.597-201ENST00000410463 100 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 RNA5SP489-201ENST00000410986 109 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 EDDM3CP-201ENST00000415977 425 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.03□□□□□ -2.08
GABPAQ06546 AL590135.1-201ENST00000422215 156 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.03□□□□□ -2.08
GABPAQ06546 AC019205.3-201ENST00000424573 156 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 MTCO1P20-201ENST00000425366 358 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 AC108667.1-201ENST00000428618 249 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 ERLEC1P1-201ENST00000433806 578 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 MTCO2P3-201ENST00000442543 421 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 AC016700.2-201ENST00000446011 156 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 RNU6-1037P-201ENST00000459571 107 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.03□□□□□ -2.08
GABPAQ06546 AC015911.1-201ENST00000495111 156 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 HMGB1P35-201ENST00000503360 598 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.03□□□□□ -2.08
GABPAQ06546 SNORA19.2-201ENST00000516013 114 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 RNU6-965P-201ENST00000516721 96 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 RNU7-193P-201ENST00000516723 65 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 RNU6-667P-201ENST00000517186 102 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 AP000763.2-201ENST00000540641 163 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.03□□□□□ -2.08
GABPAQ06546 MIR4419B-201ENST00000577260 68 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 MIR5692C1-201ENST00000585309 91 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.03□□□□□ -2.08
GABPAQ06546 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.03□□□□□ -2.08
GABPAQ06546 AC068137.3-201ENST00000639191 341 ntBASIC2.03□□□□□ -2.08
GABPAQ06546 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.03□□□□□ -2.08
GABPAQ06546 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms