Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC068205.3-201ENST00000636385 468 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.08□□□□□ -2.42
HSPG2P98160 RNA5SP493-201ENST00000364115 91 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 RNU6-878P-201ENST00000384578 110 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 MIR106A-201ENST00000384870 81 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 RNA5SP300-201ENST00000391197 107 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 RNA5SP222-201ENST00000411039 105 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.08□□□□□ -2.42
HSPG2P98160 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.08□□□□□ -2.42
HSPG2P98160 MTND1P30-201ENST00000441241 901 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.08□□□□□ -2.42
HSPG2P98160 RNU6-581P-201ENST00000516214 105 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 RNU6-965P-201ENST00000516721 96 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC137800.2-201ENST00000574375 120 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 VN1R83P-201ENST00000595685 445 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC064807.4-201ENST00000607201 407 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC090517.2-201ENST00000614966 680 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AL079343.1-201ENST00000572358 1771 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 RNU6-119P-201ENST00000364882 107 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 RNU6-46P-201ENST00000383860 107 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 RNU6-929P-201ENST00000384429 107 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.09□□□□□ -2.42
HSPG2P98160 TIMM9P1-201ENST00000436122 256 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 MTCO3P18-201ENST00000440206 761 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 AC243964.1-201ENST00000441814 261 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 RAB11AP1-201ENST00000442978 646 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.09□□□□□ -2.42
HSPG2P98160 MTCO3P7-201ENST00000510008 774 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 RNA5SP437-201ENST00000517249 129 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.09□□□□□ -2.42
HSPG2P98160 AP003392.2-201ENST00000527269 208 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 AL356057.1-201ENST00000533798 831 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 AC092608.3-201ENST00000625017 386 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
HSPG2P98160 MIR610-201ENST00000385139 96 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.09□□□□□ -2.42
HSPG2P98160 ARL5AP1-201ENST00000418991 388 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.09□□□□□ -2.42
HSPG2P98160 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.09□□□□□ -2.42
HSPG2P98160 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.09□□□□□ -2.42
HSPG2P98160 MTND1P28-201ENST00000435623 950 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 AC002429.1-201ENST00000437672 148 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 MTCO3P45-201ENST00000443036 613 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 AC092001.1-201ENST00000453012 261 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 MTND1P3-201ENST00000484956 952 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.09□□□□□ -2.42
HSPG2P98160 AC021146.9-201ENST00000512503 156 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 AC074344.1-201ENST00000512823 224 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.09□□□□□ -2.42
HSPG2P98160 AC093012.1-202ENST00000549403 582 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.09□□□□□ -2.42
HSPG2P98160 AL031281.1-201ENST00000604049 488 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 MIR3976-201ENST00000606807 139 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 AC015726.2-201ENST00000620112 122 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 MIR1248-201ENST00000629190 106 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.09□□□□□ -2.42
HSPG2P98160 AC107982.1-201ENST00000507171 1300 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
HSPG2P98160 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 SNORD114-19-201ENST00000363072 75 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 SNORA42.1-201ENST00000363515 137 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 RNU6-743P-201ENST00000364151 106 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 SUGT1P1-201ENST00000379514 476 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 RNY1P8-201ENST00000383970 114 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 MTND2P5-201ENST00000432656 1006 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 RPL39P38-201ENST00000467018 153 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 MTND5P13-201ENST00000513046 1079 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 SNORD60.2-201ENST00000516883 86 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.09□□□□□ -2.42
HSPG2P98160 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.09□□□□□ -2.42
HSPG2P98160 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.09□□□□□ -2.42
HSPG2P98160 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.09□□□□□ -2.42
HSPG2P98160 AC010133.1-201ENST00000615809 842 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 AL157786.1-207ENST00000627771 695 ntBASIC-0.09□□□□□ -2.42
HSPG2P98160 MIR18A-201ENST00000362310 71 ntBASIC-0.1□□□□□ -2.42
HSPG2P98160 RNU6-543P-201ENST00000362576 108 ntBASIC-0.1□□□□□ -2.42
HSPG2P98160 RNU6-655P-201ENST00000362858 107 ntBASIC-0.1□□□□□ -2.42
HSPG2P98160 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.1□□□□□ -2.42
HSPG2P98160 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.1□□□□□ -2.42
HSPG2P98160 MIR644A-201ENST00000385262 94 ntBASIC-0.1□□□□□ -2.42
HSPG2P98160 CBX3P9-201ENST00000402326 552 ntBASIC-0.1□□□□□ -2.42
HSPG2P98160 AL034345.1-201ENST00000407768 123 ntBASIC-0.1□□□□□ -2.42
HSPG2P98160 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.1□□□□□ -2.42
HSPG2P98160 AL035398.1-201ENST00000430869 322 ntBASIC-0.1□□□□□ -2.42
HSPG2P98160 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.1□□□□□ -2.42
HSPG2P98160 RPS26P48-201ENST00000491713 339 ntBASIC-0.1□□□□□ -2.42
HSPG2P98160 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.1□□□□□ -2.42
HSPG2P98160 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.1□□□□□ -2.42
HSPG2P98160 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.1□□□□□ -2.42
HSPG2P98160 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.1□□□□□ -2.42
HSPG2P98160 AC104820.1-201ENST00000624183 307 ntBASIC-0.1□□□□□ -2.42
HSPG2P98160 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.1□□□□□ -2.42
HSPG2P98160 MIR103A2-201ENST00000362154 78 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 RNY4P7-201ENST00000364600 96 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 RNU6-438P-201ENST00000365561 103 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 TPMTP2-201ENST00000414372 726 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms