Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.54□□□□□ -2.32
H3F3AP84243 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.54□□□□□ -2.32
H3F3AP84243 GTF2IP13-201ENST00000438487 386 ntBASIC0.54□□□□□ -2.32
H3F3AP84243 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.54□□□□□ -2.32
H3F3AP84243 AC007395.1-201ENST00000451333 677 ntBASIC0.54□□□□□ -2.32
H3F3AP84243 RN7SKP49-201ENST00000516675 260 ntBASIC0.54□□□□□ -2.32
H3F3AP84243 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.54□□□□□ -2.32
H3F3AP84243 AP001893.2-201ENST00000526949 202 ntBASIC0.54□□□□□ -2.32
H3F3AP84243 AC011979.2-201ENST00000527568 352 ntBASIC0.54□□□□□ -2.32
H3F3AP84243 ZNF321P-202ENST00000550843 495 ntBASIC0.54□□□□□ -2.32
H3F3AP84243 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.54□□□□□ -2.32
H3F3AP84243 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.54□□□□□ -2.32
H3F3AP84243 AC144521.1-201ENST00000607148 956 ntBASIC0.54□□□□□ -2.32
H3F3AP84243 AC008147.4-201ENST00000617570 1204 ntBASIC0.54□□□□□ -2.32
H3F3AP84243 AC126177.8-201ENST00000618339 1015 ntBASIC0.54□□□□□ -2.32
H3F3AP84243 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
H3F3AP84243 RNU6-1123P-201ENST00000362347 106 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 Y_RNA.224-201ENST00000364308 111 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 RNU6-1026P-201ENST00000384465 108 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 RNA5SP111-201ENST00000411386 101 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.53□□□□□ -2.32
H3F3AP84243 AL590135.1-201ENST00000422215 156 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 AC019205.3-201ENST00000424573 156 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 AC002429.1-201ENST00000437672 148 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.53□□□□□ -2.32
H3F3AP84243 AC016700.2-201ENST00000446011 156 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.53□□□□□ -2.32
H3F3AP84243 AC016925.1-201ENST00000458303 298 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 AC015911.1-201ENST00000495111 156 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 TRBVA-201ENST00000498804 316 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.53□□□□□ -2.32
H3F3AP84243 AC010587.2-201ENST00000511727 448 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
H3F3AP84243 RNU6-123P-201ENST00000516163 102 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 RNU7-51P-201ENST00000516560 62 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 RNU6-1098P-201ENST00000516772 96 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.53□□□□□ -2.32
H3F3AP84243 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.53□□□□□ -2.32
H3F3AP84243 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.53□□□□□ -2.32
H3F3AP84243 CYP4A27P-201ENST00000567218 190 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 MIR5000-201ENST00000577717 103 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 RNU6-1192P-201ENST00000612197 107 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 AC012409.4-201ENST00000612923 249 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 RNU6-489P-201ENST00000618289 107 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 AP000943.4-201ENST00000622912 357 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 MTND4P16-201ENST00000466108 1367 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 AC099786.3-201ENST00000565735 1410 ntBASIC0.53□□□□□ -2.32
H3F3AP84243 RNA5SP361-201ENST00000362686 118 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 RNU4-56P-201ENST00000364700 142 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 Y_RNA.465-201ENST00000384293 102 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 MTCYBP2-201ENST00000407745 171 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 AL031779.1-201ENST00000415663 330 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.52□□□□□ -2.33
H3F3AP84243 RAB28P5-201ENST00000427490 651 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 MTND5P2-201ENST00000442927 1142 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 AL360271.2-201ENST00000447710 161 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.52□□□□□ -2.33
H3F3AP84243 AC048334.1-201ENST00000477975 159 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 AL163973.1-201ENST00000484753 577 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.52□□□□□ -2.33
H3F3AP84243 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.52□□□□□ -2.33
H3F3AP84243 RNU6-1223P-201ENST00000517124 104 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.52□□□□□ -2.33
H3F3AP84243 AL512605.2-201ENST00000592972 256 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 AC006386.1-201ENST00000619436 415 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 MTND4P14-201ENST00000435799 1354 ntBASIC0.52□□□□□ -2.33
H3F3AP84243 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
H3F3AP84243 RNU6-877P-201ENST00000383868 107 ntBASIC0.51□□□□□ -2.33
H3F3AP84243 MIR200A-201ENST00000384875 90 ntBASIC0.51□□□□□ -2.33
H3F3AP84243 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
H3F3AP84243 RNU6-298P-201ENST00000390888 96 ntBASIC0.51□□□□□ -2.33
H3F3AP84243 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
H3F3AP84243 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.51□□□□□ -2.33
H3F3AP84243 RNU6-733P-201ENST00000410759 104 ntBASIC0.51□□□□□ -2.33
H3F3AP84243 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.51□□□□□ -2.33
H3F3AP84243 AL049829.1-201ENST00000465411 156 ntBASIC0.51□□□□□ -2.33
H3F3AP84243 RPL39P38-201ENST00000467018 153 ntBASIC0.51□□□□□ -2.33
H3F3AP84243 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.51□□□□□ -2.33
H3F3AP84243 AL121579.1-201ENST00000555129 305 ntBASIC0.51□□□□□ -2.33
H3F3AP84243 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.51□□□□□ -2.33
H3F3AP84243 AC022432.1-201ENST00000595739 310 ntBASIC0.51□□□□□ -2.33
H3F3AP84243 AL121895.2-201ENST00000619558 447 ntBASIC0.51□□□□□ -2.33
H3F3AP84243 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
H3F3AP84243 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.5□□□□□ -2.33
H3F3AP84243 RNY4P24-201ENST00000362735 96 ntBASIC0.5□□□□□ -2.33
H3F3AP84243 Y_RNA.132-201ENST00000363421 102 ntBASIC0.5□□□□□ -2.33
H3F3AP84243 RNU4-12P-201ENST00000365233 139 ntBASIC0.5□□□□□ -2.33
H3F3AP84243 SNORD12-201ENST00000391002 90 ntBASIC0.5□□□□□ -2.33
H3F3AP84243 MIR942-201ENST00000401111 86 ntBASIC0.5□□□□□ -2.33
H3F3AP84243 RNA5SP247-201ENST00000411181 105 ntBASIC0.5□□□□□ -2.33
H3F3AP84243 MTCYBP1-201ENST00000454315 1119 ntBASIC0.5□□□□□ -2.33
H3F3AP84243 RPS27P22-201ENST00000478056 241 ntBASIC0.5□□□□□ -2.33
H3F3AP84243 AP000797.1-201ENST00000478870 387 ntBASIC0.5□□□□□ -2.33
H3F3AP84243 AC107934.1-201ENST00000522215 217 ntBASIC0.5□□□□□ -2.33
H3F3AP84243 AL590705.4-201ENST00000532209 134 ntBASIC0.5□□□□□ -2.33
H3F3AP84243 AC084824.5-201ENST00000612009 413 ntBASIC0.5□□□□□ -2.33
H3F3AP84243 AC023934.1-201ENST00000574529 2389 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AC073343.1-201ENST00000328239 651 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 RNU6-433P-201ENST00000363216 104 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms