Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 SNORA12-201ENST00000391162 147 ntBASIC1.96□□□□□ -2.1
SRPXP78539 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.96□□□□□ -2.1
SRPXP78539 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.96□□□□□ -2.1
SRPXP78539 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SRPXP78539 AC078809.1-201ENST00000427601 140 ntBASIC1.96□□□□□ -2.1
SRPXP78539 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.96□□□□□ -2.1
SRPXP78539 AC236972.1-201ENST00000433225 199 ntBASIC1.96□□□□□ -2.1
SRPXP78539 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.96□□□□□ -2.1
SRPXP78539 AC079354.2-201ENST00000453523 154 ntBASIC1.96□□□□□ -2.1
SRPXP78539 BX510359.1-201ENST00000456973 237 ntBASIC1.96□□□□□ -2.1
SRPXP78539 AC104564.1-201ENST00000493028 407 ntBASIC1.96□□□□□ -2.1
SRPXP78539 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.96□□□□□ -2.1
SRPXP78539 AC114801.2-201ENST00000503825 781 ntBASIC1.96□□□□□ -2.1
SRPXP78539 AC021146.2-201ENST00000504736 556 ntBASIC1.96□□□□□ -2.1
SRPXP78539 AC005741.1-201ENST00000511094 432 ntBASIC1.96□□□□□ -2.1
SRPXP78539 Y_RNA.670-201ENST00000516255 105 ntBASIC1.96□□□□□ -2.1
SRPXP78539 RNU6-1016P-201ENST00000516689 94 ntBASIC1.96□□□□□ -2.1
SRPXP78539 RNU6-586P-201ENST00000517265 104 ntBASIC1.96□□□□□ -2.1
SRPXP78539 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.96□□□□□ -2.1
SRPXP78539 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.96□□□□□ -2.1
SRPXP78539 AC109446.1-201ENST00000566172 220 ntBASIC1.96□□□□□ -2.1
SRPXP78539 MIR4325-201ENST00000583049 90 ntBASIC1.96□□□□□ -2.1
SRPXP78539 MIR5195-201ENST00000583555 115 ntBASIC1.96□□□□□ -2.1
SRPXP78539 BNIP3P22-201ENST00000593399 556 ntBASIC1.96□□□□□ -2.1
SRPXP78539 AL670379.2-201ENST00000604983 252 ntBASIC1.96□□□□□ -2.1
SRPXP78539 AL356157.2-201ENST00000605122 111 ntBASIC1.96□□□□□ -2.1
SRPXP78539 AC018889.1-201ENST00000605372 397 ntBASIC1.96□□□□□ -2.1
SRPXP78539 AC018462.2-201ENST00000605375 395 ntBASIC1.96□□□□□ -2.1
SRPXP78539 AC016727.1-205ENST00000605437 569 ntBASIC1.96□□□□□ -2.1
SRPXP78539 Y_RNA.804-201ENST00000615262 101 ntBASIC1.96□□□□□ -2.1
SRPXP78539 MIR5739-201ENST00000619803 80 ntBASIC1.96□□□□□ -2.1
SRPXP78539 AC092608.2-201ENST00000624427 218 ntBASIC1.96□□□□□ -2.1
SRPXP78539 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.96□□□□□ -2.1
SRPXP78539 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SRPXP78539 AC016717.2-201ENST00000609089 5141 ntBASIC1.96□□□□□ -2.1
SRPXP78539 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
SRPXP78539 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.95□□□□□ -2.1
SRPXP78539 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SRPXP78539 AP000560.1-201ENST00000624150 1937 ntBASIC1.95□□□□□ -2.1
SRPXP78539 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SRPXP78539 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SRPXP78539 AC092268.1-201ENST00000342691 405 ntBASIC1.95□□□□□ -2.1
SRPXP78539 SNORA29-201ENST00000384183 140 ntBASIC1.95□□□□□ -2.1
SRPXP78539 RNU6-784P-201ENST00000384330 106 ntBASIC1.95□□□□□ -2.1
SRPXP78539 Y_RNA.529-201ENST00000384586 119 ntBASIC1.95□□□□□ -2.1
SRPXP78539 Y_RNA.594-201ENST00000410373 140 ntBASIC1.95□□□□□ -2.1
SRPXP78539 HMGB3P2-201ENST00000411913 584 ntBASIC1.95□□□□□ -2.1
SRPXP78539 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.95□□□□□ -2.1
SRPXP78539 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.95□□□□□ -2.1
SRPXP78539 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.95□□□□□ -2.1
SRPXP78539 AL161788.1-201ENST00000441805 169 ntBASIC1.95□□□□□ -2.1
SRPXP78539 RPL7P42-201ENST00000481005 679 ntBASIC1.95□□□□□ -2.1
SRPXP78539 AF186996.7-201ENST00000492781 209 ntBASIC1.95□□□□□ -2.1
SRPXP78539 AC145146.1-201ENST00000496370 254 ntBASIC1.95□□□□□ -2.1
SRPXP78539 CKS1BP2-201ENST00000497342 240 ntBASIC1.95□□□□□ -2.1
SRPXP78539 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.95□□□□□ -2.1
SRPXP78539 ACA59.1-201ENST00000515966 143 ntBASIC1.95□□□□□ -2.1
SRPXP78539 RNU6-277P-201ENST00000516272 106 ntBASIC1.95□□□□□ -2.1
SRPXP78539 RNA5SP24-201ENST00000516478 95 ntBASIC1.95□□□□□ -2.1
SRPXP78539 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.95□□□□□ -2.1
SRPXP78539 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SRPXP78539 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.95□□□□□ -2.1
SRPXP78539 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.95□□□□□ -2.1
SRPXP78539 AC011494.1-201ENST00000596454 237 ntBASIC1.95□□□□□ -2.1
SRPXP78539 AL158827.2-201ENST00000602494 330 ntBASIC1.95□□□□□ -2.1
SRPXP78539 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.95□□□□□ -2.1
SRPXP78539 AC009229.3-201ENST00000608056 282 ntBASIC1.95□□□□□ -2.1
SRPXP78539 AL132765.2-201ENST00000610812 351 ntBASIC1.95□□□□□ -2.1
SRPXP78539 AC009318.2-201ENST00000610917 651 ntBASIC1.95□□□□□ -2.1
SRPXP78539 MIR6840-201ENST00000611937 71 ntBASIC1.95□□□□□ -2.1
SRPXP78539 MIR8057-201ENST00000620957 69 ntBASIC1.95□□□□□ -2.1
SRPXP78539 MIR1291-201ENST00000627649 87 ntBASIC1.95□□□□□ -2.1
SRPXP78539 AL691447.3-201ENST00000635020 330 ntBASIC1.95□□□□□ -2.1
SRPXP78539 MIR203B-201ENST00000636080 86 ntBASIC1.95□□□□□ -2.1
SRPXP78539 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.95□□□□□ -2.1
SRPXP78539 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SRPXP78539 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
SRPXP78539 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SRPXP78539 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SRPXP78539 RNU6-1286P-201ENST00000383871 107 ntBASIC1.94□□□□□ -2.1
SRPXP78539 RNU6-968P-201ENST00000384076 107 ntBASIC1.94□□□□□ -2.1
SRPXP78539 Y_RNA.533-201ENST00000384596 114 ntBASIC1.94□□□□□ -2.1
SRPXP78539 MIR487A-201ENST00000385009 80 ntBASIC1.94□□□□□ -2.1
SRPXP78539 MIR95-201ENST00000385072 81 ntBASIC1.94□□□□□ -2.1
SRPXP78539 RNU6-1009P-201ENST00000390996 107 ntBASIC1.94□□□□□ -2.1
SRPXP78539 AC105272.1-201ENST00000438604 198 ntBASIC1.94□□□□□ -2.1
SRPXP78539 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.94□□□□□ -2.1
SRPXP78539 RPS3P1-201ENST00000456781 192 ntBASIC1.94□□□□□ -2.1
SRPXP78539 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.94□□□□□ -2.1
SRPXP78539 SNORD5.1-201ENST00000458800 75 ntBASIC1.94□□□□□ -2.1
SRPXP78539 AC022447.4-201ENST00000504053 364 ntBASIC1.94□□□□□ -2.1
SRPXP78539 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.94□□□□□ -2.1
SRPXP78539 AC079600.2-201ENST00000550076 130 ntBASIC1.94□□□□□ -2.1
SRPXP78539 RPS3AP23-202ENST00000574601 686 ntBASIC1.94□□□□□ -2.1
SRPXP78539 MIR3136-201ENST00000583498 78 ntBASIC1.94□□□□□ -2.1
SRPXP78539 AL355297.2-201ENST00000604792 129 ntBASIC1.94□□□□□ -2.1
SRPXP78539 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.94□□□□□ -2.1
SRPXP78539 AC112487.2-201ENST00000637950 304 ntBASIC1.94□□□□□ -2.1
SRPXP78539 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
SRPXP78539 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms