Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MIR186-201ENST00000384988 86 ntBASIC2.76□□□□□ -1.97
RAE1P78406 AIMP1P2-201ENST00000425294 312 ntBASIC2.76□□□□□ -1.97
RAE1P78406 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.76□□□□□ -1.97
RAE1P78406 TOMM22P6-201ENST00000465035 409 ntBASIC2.76□□□□□ -1.97
RAE1P78406 HMGN1P10-201ENST00000474557 553 ntBASIC2.76□□□□□ -1.97
RAE1P78406 AL121594.1-201ENST00000475906 575 ntBASIC2.76□□□□□ -1.97
RAE1P78406 RPL31P41-201ENST00000477967 372 ntBASIC2.76□□□□□ -1.97
RAE1P78406 RPL22P13-201ENST00000493291 347 ntBASIC2.76□□□□□ -1.97
RAE1P78406 ANXA2P1-201ENST00000505539 926 ntBASIC2.76□□□□□ -1.97
RAE1P78406 SEM1P1-201ENST00000506694 209 ntBASIC2.76□□□□□ -1.97
RAE1P78406 RNU5F-2P-201ENST00000516066 82 ntBASIC2.76□□□□□ -1.97
RAE1P78406 SCARNA17.1-201ENST00000516211 143 ntBASIC2.76□□□□□ -1.97
RAE1P78406 SCARNA17.2-201ENST00000516334 143 ntBASIC2.76□□□□□ -1.97
RAE1P78406 RNU6-764P-201ENST00000516396 105 ntBASIC2.76□□□□□ -1.97
RAE1P78406 AC091144.1-201ENST00000519573 138 ntBASIC2.76□□□□□ -1.97
RAE1P78406 HSBP1P1-201ENST00000555205 166 ntBASIC2.76□□□□□ -1.97
RAE1P78406 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.76□□□□□ -1.97
RAE1P78406 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.76□□□□□ -1.97
RAE1P78406 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.76□□□□□ -1.97
RAE1P78406 MIR5188-201ENST00000583467 113 ntBASIC2.76□□□□□ -1.97
RAE1P78406 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.76□□□□□ -1.97
RAE1P78406 AL078605.1-201ENST00000603529 500 ntBASIC2.76□□□□□ -1.97
RAE1P78406 AC016727.2-201ENST00000603988 621 ntBASIC2.76□□□□□ -1.97
RAE1P78406 AC104695.3-201ENST00000604052 296 ntBASIC2.76□□□□□ -1.97
RAE1P78406 AL034555.1-201ENST00000604816 211 ntBASIC2.76□□□□□ -1.97
RAE1P78406 AC090115.4-201ENST00000609970 188 ntBASIC2.76□□□□□ -1.97
RAE1P78406 SCARNA17.4-201ENST00000614296 143 ntBASIC2.76□□□□□ -1.97
RAE1P78406 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.76□□□□□ -1.97
RAE1P78406 AC091953.5-201ENST00000622919 233 ntBASIC2.76□□□□□ -1.97
RAE1P78406 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
RAE1P78406 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RAE1P78406 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RAE1P78406 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RAE1P78406 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RAE1P78406 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
RAE1P78406 RNU6-655P-201ENST00000362858 107 ntBASIC2.75□□□□□ -1.97
RAE1P78406 RNU6-1210P-201ENST00000363775 107 ntBASIC2.75□□□□□ -1.97
RAE1P78406 RNU4-56P-201ENST00000364700 142 ntBASIC2.75□□□□□ -1.97
RAE1P78406 U8.10-201ENST00000384260 133 ntBASIC2.75□□□□□ -1.97
RAE1P78406 Y_RNA.485-201ENST00000384395 102 ntBASIC2.75□□□□□ -1.97
RAE1P78406 Y_RNA.527-201ENST00000384573 102 ntBASIC2.75□□□□□ -1.97
RAE1P78406 MIR181A2-201ENST00000384863 110 ntBASIC2.75□□□□□ -1.97
RAE1P78406 MIR32-201ENST00000384965 70 ntBASIC2.75□□□□□ -1.97
RAE1P78406 MIR628-201ENST00000385229 95 ntBASIC2.75□□□□□ -1.97
RAE1P78406 AC012306.1-201ENST00000423267 114 ntBASIC2.75□□□□□ -1.97
RAE1P78406 AC096644.2-201ENST00000429278 159 ntBASIC2.75□□□□□ -1.97
RAE1P78406 OR2AQ1P-201ENST00000451972 200 ntBASIC2.75□□□□□ -1.97
RAE1P78406 RNU7-169P-201ENST00000459456 61 ntBASIC2.75□□□□□ -1.97
RAE1P78406 RPS29P12-201ENST00000460178 152 ntBASIC2.75□□□□□ -1.97
RAE1P78406 RPL27AP5-201ENST00000469428 449 ntBASIC2.75□□□□□ -1.97
RAE1P78406 HMGB1P35-201ENST00000503360 598 ntBASIC2.75□□□□□ -1.97
RAE1P78406 AC093852.1-201ENST00000503587 266 ntBASIC2.75□□□□□ -1.97
RAE1P78406 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.75□□□□□ -1.97
RAE1P78406 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.75□□□□□ -1.97
RAE1P78406 RNA5SP112-201ENST00000515937 99 ntBASIC2.75□□□□□ -1.97
RAE1P78406 AC008739.2-201ENST00000597006 317 ntBASIC2.75□□□□□ -1.97
RAE1P78406 MIR8057-201ENST00000620957 69 ntBASIC2.75□□□□□ -1.97
RAE1P78406 MIR3651-201ENST00000630427 90 ntBASIC2.75□□□□□ -1.97
RAE1P78406 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.75□□□□□ -1.97
RAE1P78406 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
RAE1P78406 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.75□□□□□ -1.97
RAE1P78406 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RAE1P78406 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.75□□□□□ -1.97
RAE1P78406 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.74□□□□□ -1.97
RAE1P78406 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
RAE1P78406 Y_RNA.106-201ENST00000363189 100 ntBASIC2.74□□□□□ -1.97
RAE1P78406 SNORA9.2-201ENST00000365361 133 ntBASIC2.74□□□□□ -1.97
RAE1P78406 Y_RNA.424-201ENST00000384063 103 ntBASIC2.74□□□□□ -1.97
RAE1P78406 Y_RNA.459-201ENST00000384251 102 ntBASIC2.74□□□□□ -1.97
RAE1P78406 Y_RNA.526-201ENST00000384572 110 ntBASIC2.74□□□□□ -1.97
RAE1P78406 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.74□□□□□ -1.97
RAE1P78406 MTCO3P19-201ENST00000415864 321 ntBASIC2.74□□□□□ -1.97
RAE1P78406 AC097463.2-201ENST00000421074 142 ntBASIC2.74□□□□□ -1.97
RAE1P78406 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.74□□□□□ -1.97
RAE1P78406 Z98742.2-201ENST00000431564 187 ntBASIC2.74□□□□□ -1.97
RAE1P78406 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.74□□□□□ -1.97
RAE1P78406 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.74□□□□□ -1.97
RAE1P78406 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.74□□□□□ -1.97
RAE1P78406 snoU13.6-201ENST00000458785 104 ntBASIC2.74□□□□□ -1.97
RAE1P78406 AC091179.1-201ENST00000461606 579 ntBASIC2.74□□□□□ -1.97
RAE1P78406 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.74□□□□□ -1.97
RAE1P78406 AC092185.1-201ENST00000491371 97 ntBASIC2.74□□□□□ -1.97
RAE1P78406 MIR2355-201ENST00000517199 87 ntBASIC2.74□□□□□ -1.97
RAE1P78406 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.74□□□□□ -1.97
RAE1P78406 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.74□□□□□ -1.97
RAE1P78406 AC022616.4-201ENST00000522985 181 ntBASIC2.74□□□□□ -1.97
RAE1P78406 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.74□□□□□ -1.97
RAE1P78406 CYP4A27P-201ENST00000567218 190 ntBASIC2.74□□□□□ -1.97
RAE1P78406 AC090617.3-201ENST00000573670 475 ntBASIC2.74□□□□□ -1.97
RAE1P78406 AC113195.1-201ENST00000579952 141 ntBASIC2.74□□□□□ -1.97
RAE1P78406 MIR4765-201ENST00000585007 77 ntBASIC2.74□□□□□ -1.97
RAE1P78406 AC007179.3-201ENST00000604976 235 ntBASIC2.74□□□□□ -1.97
RAE1P78406 MIR92B-201ENST00000607575 96 ntBASIC2.74□□□□□ -1.97
RAE1P78406 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RAE1P78406 Z75746.1-201ENST00000440243 2080 ntBASIC2.73□□□□□ -1.97
RAE1P78406 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RAE1P78406 MIR422A-201ENST00000362286 90 ntBASIC2.73□□□□□ -1.97
RAE1P78406 RNU6-486P-201ENST00000363116 107 ntBASIC2.73□□□□□ -1.97
RAE1P78406 RNU6-137P-201ENST00000363680 108 ntBASIC2.73□□□□□ -1.97
RAE1P78406 SNORD115-8-201ENST00000363856 82 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms