Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 Y_RNA.465-201ENST00000384293 102 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
HIST1H3AP68431 MTCYBP2-201ENST00000407745 171 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 RAB28P5-201ENST00000427490 651 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 MTND5P2-201ENST00000442927 1142 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 AL360271.2-201ENST00000447710 161 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.52□□□□□ -2.33
HIST1H3AP68431 AC048334.1-201ENST00000477975 159 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 AL163973.1-201ENST00000484753 577 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.52□□□□□ -2.33
HIST1H3AP68431 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.52□□□□□ -2.33
HIST1H3AP68431 RN7SKP49-201ENST00000516675 260 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 AC133485.1-201ENST00000567176 124 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 AC138907.6-201ENST00000568401 126 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.52□□□□□ -2.33
HIST1H3AP68431 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 AC006386.1-201ENST00000619436 415 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 MTND4P14-201ENST00000435799 1354 ntBASIC0.52□□□□□ -2.33
HIST1H3AP68431 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
HIST1H3AP68431 RNU6-877P-201ENST00000383868 107 ntBASIC0.51□□□□□ -2.33
HIST1H3AP68431 MIR200A-201ENST00000384875 90 ntBASIC0.51□□□□□ -2.33
HIST1H3AP68431 RNU6-298P-201ENST00000390888 96 ntBASIC0.51□□□□□ -2.33
HIST1H3AP68431 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
HIST1H3AP68431 RNU6-733P-201ENST00000410759 104 ntBASIC0.51□□□□□ -2.33
HIST1H3AP68431 AL031779.1-201ENST00000415663 330 ntBASIC0.51□□□□□ -2.33
HIST1H3AP68431 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.51□□□□□ -2.33
HIST1H3AP68431 AL049829.1-201ENST00000465411 156 ntBASIC0.51□□□□□ -2.33
HIST1H3AP68431 RPL39P38-201ENST00000467018 153 ntBASIC0.51□□□□□ -2.33
HIST1H3AP68431 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.51□□□□□ -2.33
HIST1H3AP68431 AL121579.1-201ENST00000555129 305 ntBASIC0.51□□□□□ -2.33
HIST1H3AP68431 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.51□□□□□ -2.33
HIST1H3AP68431 AC022432.1-201ENST00000595739 310 ntBASIC0.51□□□□□ -2.33
HIST1H3AP68431 AL121895.2-201ENST00000619558 447 ntBASIC0.51□□□□□ -2.33
HIST1H3AP68431 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
HIST1H3AP68431 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.5□□□□□ -2.33
HIST1H3AP68431 RNY4P24-201ENST00000362735 96 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 Y_RNA.132-201ENST00000363421 102 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 RNU4-12P-201ENST00000365233 139 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 SNORD12-201ENST00000391002 90 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 MIR942-201ENST00000401111 86 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 MTCYBP1-201ENST00000454315 1119 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 SNRPFP3-201ENST00000457792 225 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 RPS27P22-201ENST00000478056 241 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 AP000797.1-201ENST00000478870 387 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 AC107934.1-201ENST00000522215 217 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 AL590705.4-201ENST00000532209 134 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 HSPE1P4-201ENST00000550617 308 ntBASIC0.5□□□□□ -2.33
HIST1H3AP68431 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.5□□□□□ -2.33
HIST1H3AP68431 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.5□□□□□ -2.33
HIST1H3AP68431 AC023934.1-201ENST00000574529 2389 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AC073343.1-201ENST00000328239 651 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 RNU6-433P-201ENST00000363216 104 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 U3.9-201ENST00000363823 204 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 ERHP2-201ENST00000402323 299 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.49□□□□□ -2.33
HIST1H3AP68431 HIGD1AP15-201ENST00000416198 280 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AC244670.1-201ENST00000436879 112 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 RPS29P1-201ENST00000465274 159 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 BET1P1-201ENST00000482276 359 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 HMGN1P12-201ENST00000499125 195 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.49□□□□□ -2.33
HIST1H3AP68431 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AC011406.1-201ENST00000512440 370 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.49□□□□□ -2.33
HIST1H3AP68431 FABP5P5-201ENST00000515537 406 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 RNU6-856P-201ENST00000516959 98 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.49□□□□□ -2.33
HIST1H3AP68431 MIR3923-201ENST00000579521 83 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AC008752.3-201ENST00000588113 712 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AC121334.2-201ENST00000605387 271 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AL139286.2-201ENST00000606838 396 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AP002360.4-201ENST00000606980 481 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AC104465.1-201ENST00000611365 139 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AC084824.5-201ENST00000612009 413 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AL359740.1-201ENST00000624340 592 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 U4.7-201ENST00000638126 106 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 AC009541.1-201ENST00000438279 2662 ntBASIC0.49□□□□□ -2.33
HIST1H3AP68431 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
HIST1H3AP68431 RNU6-105P-201ENST00000363909 104 ntBASIC0.48□□□□□ -2.33
HIST1H3AP68431 Y_RNA.191-201ENST00000363972 113 ntBASIC0.48□□□□□ -2.33
HIST1H3AP68431 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
HIST1H3AP68431 RNU6-17P-201ENST00000384245 107 ntBASIC0.48□□□□□ -2.33
HIST1H3AP68431 RNU6-18P-201ENST00000384527 107 ntBASIC0.48□□□□□ -2.33
HIST1H3AP68431 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
HIST1H3AP68431 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.48□□□□□ -2.33
HIST1H3AP68431 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.48□□□□□ -2.33
HIST1H3AP68431 AC060773.1-201ENST00000421698 310 ntBASIC0.48□□□□□ -2.33
HIST1H3AP68431 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.48□□□□□ -2.33
HIST1H3AP68431 AC011233.1-201ENST00000422812 283 ntBASIC0.48□□□□□ -2.33
HIST1H3AP68431 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.48□□□□□ -2.33
HIST1H3AP68431 CETN4P-201ENST00000432407 469 ntBASIC0.48□□□□□ -2.33
HIST1H3AP68431 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.48□□□□□ -2.33
HIST1H3AP68431 AC243964.1-201ENST00000441814 261 ntBASIC0.48□□□□□ -2.33
HIST1H3AP68431 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.48□□□□□ -2.33
HIST1H3AP68431 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.48□□□□□ -2.33
HIST1H3AP68431 AC105148.1-201ENST00000604961 409 ntBASIC0.48□□□□□ -2.33
HIST1H3AP68431 CTHRC1P1-201ENST00000605383 469 ntBASIC0.48□□□□□ -2.33
HIST1H3AP68431 PART1_2.1-201ENST00000612397 250 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms