Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RNU6-302P-201ENST00000365249 107 ntBASIC-0.13□□□□□ -2.43
UBA52P62987 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.13□□□□□ -2.43
UBA52P62987 RNU6-432P-201ENST00000384196 109 ntBASIC-0.13□□□□□ -2.43
UBA52P62987 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
UBA52P62987 RNA5SP219-201ENST00000390940 113 ntBASIC-0.13□□□□□ -2.43
UBA52P62987 AC005094.1-201ENST00000440420 368 ntBASIC-0.13□□□□□ -2.43
UBA52P62987 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.13□□□□□ -2.43
UBA52P62987 MTCO3P28-201ENST00000513351 515 ntBASIC-0.13□□□□□ -2.43
UBA52P62987 AC141557.1-201ENST00000540982 400 ntBASIC-0.13□□□□□ -2.43
UBA52P62987 EIF1P4-201ENST00000572664 335 ntBASIC-0.13□□□□□ -2.43
UBA52P62987 MIR3136-201ENST00000583498 78 ntBASIC-0.13□□□□□ -2.43
UBA52P62987 AL162730.1-201ENST00000605734 292 ntBASIC-0.13□□□□□ -2.43
UBA52P62987 AL355816.2-201ENST00000610049 647 ntBASIC-0.13□□□□□ -2.43
UBA52P62987 AC253576.2-201ENST00000618815 580 ntBASIC-0.13□□□□□ -2.43
UBA52P62987 SNORD56.4-201ENST00000363883 71 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.14□□□□□ -2.43
UBA52P62987 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
UBA52P62987 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 SNORD41-201ENST00000386967 70 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 SNORA12.2-201ENST00000391040 156 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.14□□□□□ -2.43
UBA52P62987 MTCO1P21-201ENST00000416634 589 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 RPL37P21-201ENST00000435890 276 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.14□□□□□ -2.43
UBA52P62987 U7.7-201ENST00000459276 60 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.14□□□□□ -2.43
UBA52P62987 AP003049.1-201ENST00000529418 457 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 AC023538.1-201ENST00000534576 736 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 AC090888.2-201ENST00000559765 1144 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 MIR4666A-201ENST00000580160 79 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.14□□□□□ -2.43
UBA52P62987 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 AC240442.1-201ENST00000616055 283 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 AL445264.1-201ENST00000621719 171 ntBASIC-0.14□□□□□ -2.43
UBA52P62987 SNORA42.1-201ENST00000363515 137 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 SNORA36.2-201ENST00000384004 127 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 SNORD116-13-201ENST00000384408 92 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 RNU6-505P-201ENST00000384427 107 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 MIR140-201ENST00000385282 100 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 AL359634.1-202ENST00000404721 284 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 AL355796.1-201ENST00000406706 323 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 PDCL2P1-201ENST00000419302 352 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.15□□□□□ -2.43
UBA52P62987 RAC1P6-201ENST00000423911 575 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 AC092427.1-201ENST00000439177 601 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 SNRPEP8-201ENST00000442866 260 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 MTND5P2-201ENST00000442927 1142 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.15□□□□□ -2.43
UBA52P62987 NFU1P2-201ENST00000448700 469 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 SNRPGP12-201ENST00000449481 213 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 RNU7-34P-201ENST00000459394 64 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 AC093534.1-201ENST00000504977 132 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 MTND1P22-201ENST00000510572 951 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.15□□□□□ -2.43
UBA52P62987 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.15□□□□□ -2.43
UBA52P62987 TPRKBP2-201ENST00000565969 475 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 MIR3678-201ENST00000578455 94 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.15□□□□□ -2.43
UBA52P62987 AC091805.2-201ENST00000603848 235 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 AC007363.1-201ENST00000604736 620 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.15□□□□□ -2.43
UBA52P62987 RMST_10.1-201ENST00000616309 154 ntBASIC-0.15□□□□□ -2.43
UBA52P62987 AC092268.1-201ENST00000342691 405 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 RNA5SP98-201ENST00000363158 137 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.44
UBA52P62987 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 SNORA8.3-201ENST00000384679 139 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 MIR214-201ENST00000385214 110 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.16□□□□□ -2.44
UBA52P62987 MTND2P6-201ENST00000455337 1030 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 RNU7-140P-201ENST00000459546 60 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.16□□□□□ -2.44
UBA52P62987 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.16□□□□□ -2.44
UBA52P62987 AC112206.3-201ENST00000514578 389 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 AC011195.1-201ENST00000578177 177 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 SNORA59B-202ENST00000578183 701 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 MIR4290-201ENST00000583807 95 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 SNRPGP20-201ENST00000604477 205 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 FAM157A-202ENST00000615155 405 ntBASIC-0.16□□□□□ -2.44
UBA52P62987 MTND4P21-201ENST00000453886 1357 ntBASIC-0.17□□□□□ -2.44
UBA52P62987 RNU6-97P-201ENST00000363387 104 ntBASIC-0.17□□□□□ -2.44
UBA52P62987 SNORD114-9-201ENST00000364370 72 ntBASIC-0.17□□□□□ -2.44
UBA52P62987 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
UBA52P62987 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
UBA52P62987 RNA5SP390-201ENST00000410191 113 ntBASIC-0.17□□□□□ -2.44
UBA52P62987 RNA5SP222-201ENST00000411039 105 ntBASIC-0.17□□□□□ -2.44
UBA52P62987 RNU6-177P-201ENST00000411257 104 ntBASIC-0.17□□□□□ -2.44
UBA52P62987 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.17□□□□□ -2.44
UBA52P62987 C1DP2-201ENST00000418167 426 ntBASIC-0.17□□□□□ -2.44
UBA52P62987 Z95118.1-201ENST00000421372 247 ntBASIC-0.17□□□□□ -2.44
UBA52P62987 AC004854.1-201ENST00000440356 349 ntBASIC-0.17□□□□□ -2.44
UBA52P62987 C1DP4-201ENST00000455429 424 ntBASIC-0.17□□□□□ -2.44
UBA52P62987 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.17□□□□□ -2.44
UBA52P62987 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.17□□□□□ -2.44
UBA52P62987 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.17□□□□□ -2.44
UBA52P62987 SNORA70.12-201ENST00000516084 153 ntBASIC-0.17□□□□□ -2.44
UBA52P62987 AC106038.2-201ENST00000520706 568 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms