Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC010469.2-201ENST00000496412 480 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 RNU6-408P-201ENST00000515910 100 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 RNU2-53P-201ENST00000516257 147 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 AC022868.1-201ENST00000517767 391 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.55□□□□□ -1.84
HERVK_113P62684 CR383656.8-201ENST00000549046 145 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 AC007375.1-201ENST00000554513 578 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 AC021739.1-201ENST00000559631 174 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 HMGN2P15-201ENST00000585707 270 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 AC005357.1-201ENST00000588399 301 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.55□□□□□ -1.84
HERVK_113P62684 XIST_intron.1-201ENST00000619444 68 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 SCARNA4-201ENST00000629045 128 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.55□□□□□ -1.84
HERVK_113P62684 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
HERVK_113P62684 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HERVK_113P62684 AC110491.1-201ENST00000562191 2010 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 AL355596.1-201ENST00000565399 3996 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HERVK_113P62684 AC010615.1-201ENST00000594254 1764 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 Y_RNA.183-201ENST00000363882 113 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 Y_RNA.504-201ENST00000384481 104 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 RNU6-130P-201ENST00000411112 103 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 RNU6-847P-201ENST00000411115 108 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.54□□□□□ -1.84
HERVK_113P62684 LINC01399-202ENST00000458450 244 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 RPS26P21-201ENST00000475397 348 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 MED28P2-201ENST00000475771 317 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 RN7SL429P-201ENST00000479090 223 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 RN7SL489P-201ENST00000486185 223 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 RN7SL327P-201ENST00000488659 223 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.54□□□□□ -1.84
HERVK_113P62684 AC245166.1-201ENST00000521012 253 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 AP003733.2-201ENST00000529409 171 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.54□□□□□ -1.84
HERVK_113P62684 MIR4474-201ENST00000579189 78 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 AC073410.2-201ENST00000603240 332 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 RN7SL853P-201ENST00000617250 223 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 MIR6076-201ENST00000617521 113 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 MIR3199-2-201ENST00000636243 86 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 U6.92-201ENST00000636464 89 ntBASIC3.54□□□□□ -1.84
HERVK_113P62684 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.54□□□□□ -1.84
HERVK_113P62684 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.54□□□□□ -1.84
HERVK_113P62684 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.54□□□□□ -1.84
HERVK_113P62684 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HERVK_113P62684 AC091152.2-201ENST00000591628 2569 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 Y_RNA.105-201ENST00000363182 111 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 RNU6-142P-201ENST00000384019 107 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 Y_RNA.458-201ENST00000384240 102 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 RNU6-611P-201ENST00000384276 104 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 MIR591-201ENST00000385290 95 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 RNU2-38P-201ENST00000410856 79 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 HMGN2P20-201ENST00000437531 273 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 AC007969.2-201ENST00000441891 191 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 AL135938.1-201ENST00000443141 297 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 AL590664.1-201ENST00000448065 339 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 AC087477.1-201ENST00000465747 340 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 AC023157.2-201ENST00000540596 141 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.53□□□□□ -1.84
HERVK_113P62684 HSPE1P4-201ENST00000550617 308 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 AC090617.3-201ENST00000573670 475 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 AC009163.5-201ENST00000575421 637 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 RPL23AP88-201ENST00000605759 454 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 AC091903.1-201ENST00000624322 454 ntBASIC3.53□□□□□ -1.84
HERVK_113P62684 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.53□□□□□ -1.84
HERVK_113P62684 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.53□□□□□ -1.84
HERVK_113P62684 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HERVK_113P62684 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.53□□□□□ -1.84
HERVK_113P62684 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
HERVK_113P62684 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.53□□□□□ -1.85
HERVK_113P62684 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HERVK_113P62684 MIR449A-201ENST00000362113 91 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 SNORD32A-201ENST00000364805 84 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 SNORA29-201ENST00000384183 140 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 RPL21P38-201ENST00000418090 167 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 GPM6BP3-201ENST00000442797 145 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.52□□□□□ -1.85
HERVK_113P62684 SNORD127-201ENST00000458892 86 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 AF186996.7-201ENST00000492781 209 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 RNA5SP217-201ENST00000515959 91 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 RNA5SP367-201ENST00000516557 118 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 SNORA31.23-201ENST00000517219 133 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 AP002770.2-201ENST00000543613 532 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 AC093023.1-201ENST00000547375 507 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 AC006199.1-201ENST00000548728 219 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.52□□□□□ -1.85
HERVK_113P62684 MIR3162-201ENST00000581818 82 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 ELOCP29-201ENST00000588193 334 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 AL355877.2-201ENST00000603670 358 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 AC004944.1-201ENST00000517807 3059 ntBASIC3.52□□□□□ -1.85
HERVK_113P62684 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HERVK_113P62684 Y_RNA.350-201ENST00000365409 98 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 Y_RNA.439-201ENST00000384119 94 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 RNU6-301P-201ENST00000384277 107 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 Y_RNA.477-201ENST00000384352 108 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 RNU6-843P-201ENST00000384454 104 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 RNU6-541P-201ENST00000384709 110 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 RPL21P3-201ENST00000395517 478 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 RNU6-121P-201ENST00000410525 99 ntBASIC3.51□□□□□ -1.85
HERVK_113P62684 SDAD1P3-201ENST00000427380 333 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms