Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MTCO2P24-201ENST00000515611 426 ntBASIC2.56□□□□□ -2
SEC61A1P61619 AC131281.1-201ENST00000522984 164 ntBASIC2.56□□□□□ -2
SEC61A1P61619 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.56□□□□□ -2
SEC61A1P61619 AC008739.2-201ENST00000597006 317 ntBASIC2.56□□□□□ -2
SEC61A1P61619 AC019159.1-201ENST00000605094 187 ntBASIC2.56□□□□□ -2
SEC61A1P61619 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.56□□□□□ -2
SEC61A1P61619 MIR622-201ENST00000638396 96 ntBASIC2.56□□□□□ -2
SEC61A1P61619 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.56□□□□□ -2
SEC61A1P61619 AL161431.1-201ENST00000618966 4205 ntBASIC2.56□□□□□ -2
SEC61A1P61619 AC091564.4-201ENST00000533934 2194 ntBASIC2.56□□□□□ -2
SEC61A1P61619 MAPK10-266ENST00000641066 6555 ntBASIC2.55□□□□□ -2
SEC61A1P61619 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.55□□□□□ -2
SEC61A1P61619 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SEC61A1P61619 Y_RNA.149-201ENST00000363558 117 ntBASIC2.55□□□□□ -2
SEC61A1P61619 RNU6-1027P-201ENST00000383998 107 ntBASIC2.55□□□□□ -2
SEC61A1P61619 RNU6-968P-201ENST00000384076 107 ntBASIC2.55□□□□□ -2
SEC61A1P61619 SNORA69.1-201ENST00000390904 137 ntBASIC2.55□□□□□ -2
SEC61A1P61619 RNA5SP354-201ENST00000391247 136 ntBASIC2.55□□□□□ -2
SEC61A1P61619 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.55□□□□□ -2
SEC61A1P61619 AC004383.1-201ENST00000438135 289 ntBASIC2.55□□□□□ -2
SEC61A1P61619 AC007969.2-201ENST00000441891 191 ntBASIC2.55□□□□□ -2
SEC61A1P61619 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.55□□□□□ -2
SEC61A1P61619 MTCO3P8-201ENST00000453691 755 ntBASIC2.55□□□□□ -2
SEC61A1P61619 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.55□□□□□ -2
SEC61A1P61619 RPL30P12-201ENST00000474666 353 ntBASIC2.55□□□□□ -2
SEC61A1P61619 MED28P2-201ENST00000475771 317 ntBASIC2.55□□□□□ -2
SEC61A1P61619 RPL30P10-201ENST00000488148 337 ntBASIC2.55□□□□□ -2
SEC61A1P61619 RPL30P1-201ENST00000488676 339 ntBASIC2.55□□□□□ -2
SEC61A1P61619 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.55□□□□□ -2
SEC61A1P61619 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.55□□□□□ -2
SEC61A1P61619 RNU6-475P-201ENST00000516073 104 ntBASIC2.55□□□□□ -2
SEC61A1P61619 SCARNA17.1-201ENST00000516211 143 ntBASIC2.55□□□□□ -2
SEC61A1P61619 SCARNA17.2-201ENST00000516334 143 ntBASIC2.55□□□□□ -2
SEC61A1P61619 Y_RNA.721-201ENST00000517207 102 ntBASIC2.55□□□□□ -2
SEC61A1P61619 SNORA31.23-201ENST00000517219 133 ntBASIC2.55□□□□□ -2
SEC61A1P61619 AC144568.1-201ENST00000520139 137 ntBASIC2.55□□□□□ -2
SEC61A1P61619 CR383656.8-201ENST00000549046 145 ntBASIC2.55□□□□□ -2
SEC61A1P61619 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.55□□□□□ -2
SEC61A1P61619 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.55□□□□□ -2
SEC61A1P61619 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.55□□□□□ -2
SEC61A1P61619 AC009163.5-201ENST00000575421 637 ntBASIC2.55□□□□□ -2
SEC61A1P61619 MIR3149-201ENST00000584629 83 ntBASIC2.55□□□□□ -2
SEC61A1P61619 AC010928.2-201ENST00000588017 287 ntBASIC2.55□□□□□ -2
SEC61A1P61619 AL121655.1-201ENST00000605811 308 ntBASIC2.55□□□□□ -2
SEC61A1P61619 AC233981.2-201ENST00000611524 1614 ntBASIC2.55□□□□□ -2
SEC61A1P61619 SCARNA17.4-201ENST00000614296 143 ntBASIC2.55□□□□□ -2
SEC61A1P61619 U2.1-201ENST00000618978 145 ntBASIC2.55□□□□□ -2
SEC61A1P61619 AC024581.2-201ENST00000619986 252 ntBASIC2.55□□□□□ -2
SEC61A1P61619 AC006386.2-201ENST00000624491 75 ntBASIC2.55□□□□□ -2
SEC61A1P61619 AC012005.1-201ENST00000624575 75 ntBASIC2.55□□□□□ -2
SEC61A1P61619 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
SEC61A1P61619 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.55□□□□□ -2
SEC61A1P61619 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
SEC61A1P61619 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.55□□□□□ -2
SEC61A1P61619 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
SEC61A1P61619 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SEC61A1P61619 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.54□□□□□ -2
SEC61A1P61619 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SEC61A1P61619 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
SEC61A1P61619 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SEC61A1P61619 AL355596.1-201ENST00000565399 3996 ntBASIC2.54□□□□□ -2
SEC61A1P61619 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.54□□□□□ -2
SEC61A1P61619 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.54□□□□□ -2
SEC61A1P61619 MIR22-201ENST00000362190 85 ntBASIC2.54□□□□□ -2
SEC61A1P61619 RNU1-105P-201ENST00000363470 161 ntBASIC2.54□□□□□ -2
SEC61A1P61619 Y_RNA.176-201ENST00000363815 109 ntBASIC2.54□□□□□ -2
SEC61A1P61619 SNORA71.1-201ENST00000364523 117 ntBASIC2.54□□□□□ -2
SEC61A1P61619 SNORD32A-201ENST00000364805 84 ntBASIC2.54□□□□□ -2
SEC61A1P61619 SNORA51.11-201ENST00000384442 131 ntBASIC2.54□□□□□ -2
SEC61A1P61619 Y_RNA.504-201ENST00000384481 104 ntBASIC2.54□□□□□ -2
SEC61A1P61619 SNORA44-201ENST00000384584 132 ntBASIC2.54□□□□□ -2
SEC61A1P61619 Y_RNA.574-201ENST00000384766 95 ntBASIC2.54□□□□□ -2
SEC61A1P61619 MIR628-201ENST00000385229 95 ntBASIC2.54□□□□□ -2
SEC61A1P61619 MIR190B-201ENST00000401119 79 ntBASIC2.54□□□□□ -2
SEC61A1P61619 Y_RNA.592-201ENST00000410274 109 ntBASIC2.54□□□□□ -2
SEC61A1P61619 PTGES3P4-201ENST00000426243 356 ntBASIC2.54□□□□□ -2
SEC61A1P61619 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.54□□□□□ -2
SEC61A1P61619 AL353705.4-201ENST00000449661 238 ntBASIC2.54□□□□□ -2
SEC61A1P61619 AC012308.1-201ENST00000451232 178 ntBASIC2.54□□□□□ -2
SEC61A1P61619 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.54□□□□□ -2
SEC61A1P61619 U8.22-201ENST00000459141 133 ntBASIC2.54□□□□□ -2
SEC61A1P61619 RPS29P12-201ENST00000460178 152 ntBASIC2.54□□□□□ -2
SEC61A1P61619 RN7SL297P-201ENST00000483161 293 ntBASIC2.54□□□□□ -2
SEC61A1P61619 AP001025.1-201ENST00000486139 332 ntBASIC2.54□□□□□ -2
SEC61A1P61619 RNU6-397P-201ENST00000516226 104 ntBASIC2.54□□□□□ -2
SEC61A1P61619 SNORA31.6-201ENST00000516241 130 ntBASIC2.54□□□□□ -2
SEC61A1P61619 Y_RNA.715-201ENST00000517082 110 ntBASIC2.54□□□□□ -2
SEC61A1P61619 AC022616.4-201ENST00000522985 181 ntBASIC2.54□□□□□ -2
SEC61A1P61619 AP002404.1-201ENST00000532005 451 ntBASIC2.54□□□□□ -2
SEC61A1P61619 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.54□□□□□ -2
SEC61A1P61619 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.54□□□□□ -2
SEC61A1P61619 AC107016.2-201ENST00000547968 190 ntBASIC2.54□□□□□ -2
SEC61A1P61619 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.54□□□□□ -2
SEC61A1P61619 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.54□□□□□ -2
SEC61A1P61619 VN1R91P-201ENST00000594377 169 ntBASIC2.54□□□□□ -2
SEC61A1P61619 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.54□□□□□ -2
SEC61A1P61619 VN1R107P-201ENST00000601784 209 ntBASIC2.54□□□□□ -2
SEC61A1P61619 AL137843.1-201ENST00000605078 385 ntBASIC2.54□□□□□ -2
SEC61A1P61619 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.54□□□□□ -2
SEC61A1P61619 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 449.5 ms