Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.43□□□□□ -2.02
RPS3AP61247 AC132942.1-201ENST00000486753 483 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.43□□□□□ -2.02
RPS3AP61247 AC021146.2-201ENST00000504736 556 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 AC116353.2-201ENST00000505332 712 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 PRDX4P1-201ENST00000507189 574 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.43□□□□□ -2.02
RPS3AP61247 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.43□□□□□ -2.02
RPS3AP61247 RNU6-667P-201ENST00000517186 102 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.43□□□□□ -2.02
RPS3AP61247 AC079600.2-201ENST00000550076 130 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 AC121758.2-201ENST00000553271 193 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 AC026464.5-201ENST00000562497 722 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.43□□□□□ -2.02
RPS3AP61247 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.43□□□□□ -2.02
RPS3AP61247 MIR4319-201ENST00000577285 85 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 MIR3126-201ENST00000577443 74 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 POLR3GP2-201ENST00000588366 668 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 RBM11P1-201ENST00000604951 799 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 PCGEM1.1-201ENST00000613431 131 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 AC005520.5-201ENST00000613926 164 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 DUXAP9-208ENST00000622815 614 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 AC092608.2-201ENST00000624427 218 ntBASIC2.43□□□□□ -2.02
RPS3AP61247 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
RPS3AP61247 CBX3P1-201ENST00000325243 554 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.42□□□□□ -2.02
RPS3AP61247 Y_RNA.160-201ENST00000363677 92 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 U3.9-201ENST00000363823 204 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 Y_RNA.279-201ENST00000364763 95 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 RNU6-968P-201ENST00000384076 107 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 RNU6-767P-201ENST00000384132 107 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 MT-TL1-201ENST00000386347 75 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 RNU6-876P-201ENST00000391295 104 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RPS3AP61247 RNU2-48P-201ENST00000410694 191 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.42□□□□□ -2.02
RPS3AP61247 PPP1R2P5-201ENST00000457256 603 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 SRIP1-201ENST00000489235 288 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 SNORA4.4-201ENST00000515921 135 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 ACA59.1-201ENST00000515966 143 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 RN7SKP132-201ENST00000516001 208 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 AC245884.12-201ENST00000615364 59 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 AL132822.1-201ENST00000617063 513 ntBASIC2.42□□□□□ -2.02
RPS3AP61247 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
RPS3AP61247 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
RPS3AP61247 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.42□□□□□ -2.02
RPS3AP61247 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RPS3AP61247 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.41□□□□□ -2.02
RPS3AP61247 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RPS3AP61247 RNU1-112P-201ENST00000364401 164 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 Y_RNA.303-201ENST00000364998 94 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.41□□□□□ -2.02
RPS3AP61247 SNORA29-201ENST00000384183 140 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 Y_RNA.510-201ENST00000384511 114 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 MIR144-201ENST00000384886 86 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 MIR524-201ENST00000385242 87 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 EDDM3CP-201ENST00000415977 425 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.41□□□□□ -2.02
RPS3AP61247 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.41□□□□□ -2.02
RPS3AP61247 AL513124.1-201ENST00000450410 614 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.41□□□□□ -2.02
RPS3AP61247 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 EIF4A1P12-201ENST00000551910 141 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.41□□□□□ -2.02
RPS3AP61247 MIR4790-201ENST00000577799 79 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 AC026271.5-201ENST00000577873 130 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 AP001094.1-201ENST00000579805 193 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.41□□□□□ -2.02
RPS3AP61247 SNRPGP17-201ENST00000603780 214 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.41□□□□□ -2.02
RPS3AP61247 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RPS3AP61247 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RPS3AP61247 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RPS3AP61247 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RPS3AP61247 AC062016.1-201ENST00000355719 319 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 RNU5B-2P-201ENST00000363036 113 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 SNORA3A-201ENST00000364113 130 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 RN7SKP32-201ENST00000410167 303 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 RPL21P111-201ENST00000418453 477 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.4□□□□□ -2.03
RPS3AP61247 RPS12P2-201ENST00000439728 269 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 Y_RNA.682-201ENST00000516457 100 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 RNU6-965P-201ENST00000516721 96 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 RNA5SP137-201ENST00000516833 135 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 RNU1-54P-201ENST00000517181 120 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.4□□□□□ -2.03
RPS3AP61247 AC243972.3-201ENST00000539655 198 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.4□□□□□ -2.03
RPS3AP61247 MIR4635-201ENST00000583759 79 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 AP000654.2-201ENST00000605633 586 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 AC099654.14-201ENST00000638599 341 ntBASIC2.4□□□□□ -2.03
RPS3AP61247 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.39□□□□□ -2.03
RPS3AP61247 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
RPS3AP61247 AC233981.2-201ENST00000611524 1614 ntBASIC2.39□□□□□ -2.03
RPS3AP61247 SNORA12-201ENST00000391162 147 ntBASIC2.39□□□□□ -2.03
RPS3AP61247 MIR208B-201ENST00000401172 77 ntBASIC2.39□□□□□ -2.03
RPS3AP61247 RNA5SP494-201ENST00000410653 129 ntBASIC2.39□□□□□ -2.03
RPS3AP61247 EIF4EP2-201ENST00000422816 654 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms