Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL773524.1-201ENST00000614065 229 ntBASIC1.9□□□□□ -2.11
SRP54P61011 DUXAP9-208ENST00000622815 614 ntBASIC1.9□□□□□ -2.11
SRP54P61011 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.9□□□□□ -2.11
SRP54P61011 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.11
SRP54P61011 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SRP54P61011 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.89□□□□□ -2.11
SRP54P61011 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SRP54P61011 RNU6-82P-201ENST00000363970 107 ntBASIC1.89□□□□□ -2.11
SRP54P61011 SNORD116-1-201ENST00000384335 95 ntBASIC1.89□□□□□ -2.11
SRP54P61011 RNU6-1106P-201ENST00000390845 107 ntBASIC1.89□□□□□ -2.11
SRP54P61011 RNA5SP219-201ENST00000390940 113 ntBASIC1.89□□□□□ -2.11
SRP54P61011 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
SRP54P61011 AL663109.1-201ENST00000411498 844 ntBASIC1.89□□□□□ -2.11
SRP54P61011 AC244636.1-201ENST00000421152 228 ntBASIC1.89□□□□□ -2.11
SRP54P61011 RPL7P54-201ENST00000438336 674 ntBASIC1.89□□□□□ -2.11
SRP54P61011 RPL23AP6-201ENST00000446637 472 ntBASIC1.89□□□□□ -2.11
SRP54P61011 HMGN2P23-201ENST00000456759 269 ntBASIC1.89□□□□□ -2.11
SRP54P61011 AC087884.1-201ENST00000469738 328 ntBASIC1.89□□□□□ -2.11
SRP54P61011 AC083798.1-201ENST00000472671 131 ntBASIC1.89□□□□□ -2.11
SRP54P61011 SNORA14.1-201ENST00000516113 141 ntBASIC1.89□□□□□ -2.11
SRP54P61011 RNU6-991P-201ENST00000516168 107 ntBASIC1.89□□□□□ -2.11
SRP54P61011 SNORA31.16-201ENST00000516773 139 ntBASIC1.89□□□□□ -2.11
SRP54P61011 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.89□□□□□ -2.11
SRP54P61011 AP005639.2-201ENST00000527592 928 ntBASIC1.89□□□□□ -2.11
SRP54P61011 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.89□□□□□ -2.11
SRP54P61011 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.89□□□□□ -2.11
SRP54P61011 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.89□□□□□ -2.11
SRP54P61011 MIR3923-201ENST00000579521 83 ntBASIC1.89□□□□□ -2.11
SRP54P61011 AC139792.3-201ENST00000623525 224 ntBASIC1.89□□□□□ -2.11
SRP54P61011 Y_RNA.481-201ENST00000384373 102 ntBASIC1.88□□□□□ -2.11
SRP54P61011 RNU11-3P-201ENST00000391111 133 ntBASIC1.88□□□□□ -2.11
SRP54P61011 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.88□□□□□ -2.11
SRP54P61011 AP000275.1-201ENST00000411943 390 ntBASIC1.88□□□□□ -2.11
SRP54P61011 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SRP54P61011 EIF1AXP1-201ENST00000419267 435 ntBASIC1.88□□□□□ -2.11
SRP54P61011 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.88□□□□□ -2.11
SRP54P61011 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
SRP54P61011 EIF4EP2-201ENST00000422816 654 ntBASIC1.88□□□□□ -2.11
SRP54P61011 AL121601.2-201ENST00000438019 707 ntBASIC1.88□□□□□ -2.11
SRP54P61011 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.88□□□□□ -2.11
SRP54P61011 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.88□□□□□ -2.11
SRP54P61011 RNU6-261P-201ENST00000459506 102 ntBASIC1.88□□□□□ -2.11
SRP54P61011 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.88□□□□□ -2.11
SRP54P61011 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.88□□□□□ -2.11
SRP54P61011 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.88□□□□□ -2.11
SRP54P61011 RNU6-189P-201ENST00000516120 101 ntBASIC1.88□□□□□ -2.11
SRP54P61011 RNU6-405P-201ENST00000516637 110 ntBASIC1.88□□□□□ -2.11
SRP54P61011 RNU6-567P-201ENST00000516746 107 ntBASIC1.88□□□□□ -2.11
SRP54P61011 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.88□□□□□ -2.11
SRP54P61011 AK6P1-201ENST00000540219 478 ntBASIC1.88□□□□□ -2.11
SRP54P61011 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.88□□□□□ -2.11
SRP54P61011 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
SRP54P61011 VN1R80P-201ENST00000597126 338 ntBASIC1.88□□□□□ -2.11
SRP54P61011 CYP2C61P-201ENST00000604072 290 ntBASIC1.88□□□□□ -2.11
SRP54P61011 AL022345.1-201ENST00000607292 135 ntBASIC1.88□□□□□ -2.11
SRP54P61011 AC073534.2-201ENST00000620377 381 ntBASIC1.88□□□□□ -2.11
SRP54P61011 U1.36-201ENST00000620684 176 ntBASIC1.88□□□□□ -2.11
SRP54P61011 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
SRP54P61011 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SRP54P61011 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SRP54P61011 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.88□□□□□ -2.11
SRP54P61011 RNA5SP99-201ENST00000364020 114 ntBASIC1.87□□□□□ -2.11
SRP54P61011 RNU6-1322P-201ENST00000364309 107 ntBASIC1.87□□□□□ -2.11
SRP54P61011 RNU6-234P-201ENST00000365229 104 ntBASIC1.87□□□□□ -2.11
SRP54P61011 Y_RNA.381-201ENST00000365666 102 ntBASIC1.87□□□□□ -2.11
SRP54P61011 RNU6-26P-201ENST00000383985 107 ntBASIC1.87□□□□□ -2.11
SRP54P61011 SNORD37.1-201ENST00000390968 65 ntBASIC1.87□□□□□ -2.11
SRP54P61011 RNU6-482P-201ENST00000391068 107 ntBASIC1.87□□□□□ -2.11
SRP54P61011 SNORA12-201ENST00000391162 147 ntBASIC1.87□□□□□ -2.11
SRP54P61011 RNA5SP212-201ENST00000391223 107 ntBASIC1.87□□□□□ -2.11
SRP54P61011 RNA5SP201-201ENST00000410316 124 ntBASIC1.87□□□□□ -2.11
SRP54P61011 RNU2-20P-201ENST00000410425 191 ntBASIC1.87□□□□□ -2.11
SRP54P61011 CYCSP49-201ENST00000420810 319 ntBASIC1.87□□□□□ -2.11
SRP54P61011 HMGN2P19-201ENST00000425149 265 ntBASIC1.87□□□□□ -2.11
SRP54P61011 UBE2V1P4-201ENST00000425374 344 ntBASIC1.87□□□□□ -2.11
SRP54P61011 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.87□□□□□ -2.11
SRP54P61011 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.87□□□□□ -2.11
SRP54P61011 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.87□□□□□ -2.11
SRP54P61011 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.87□□□□□ -2.11
SRP54P61011 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.87□□□□□ -2.11
SRP54P61011 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.87□□□□□ -2.11
SRP54P61011 CENPUP1-201ENST00000526649 1202 ntBASIC1.87□□□□□ -2.11
SRP54P61011 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.87□□□□□ -2.11
SRP54P61011 AC104383.1-201ENST00000530297 370 ntBASIC1.87□□□□□ -2.11
SRP54P61011 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.87□□□□□ -2.11
SRP54P61011 AC021231.3-201ENST00000558497 370 ntBASIC1.87□□□□□ -2.11
SRP54P61011 AC005296.1-201ENST00000616145 209 ntBASIC1.87□□□□□ -2.11
SRP54P61011 AL353997.5-201ENST00000618886 171 ntBASIC1.87□□□□□ -2.11
SRP54P61011 AC103705.1-201ENST00000619013 241 ntBASIC1.87□□□□□ -2.11
SRP54P61011 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SRP54P61011 RNU6-160P-201ENST00000384591 107 ntBASIC1.86□□□□□ -2.11
SRP54P61011 MIR597-201ENST00000384968 97 ntBASIC1.86□□□□□ -2.11
SRP54P61011 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SRP54P61011 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.86□□□□□ -2.11
SRP54P61011 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.86□□□□□ -2.11
SRP54P61011 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.86□□□□□ -2.11
SRP54P61011 MTCO3P38-201ENST00000468910 766 ntBASIC1.86□□□□□ -2.11
SRP54P61011 RPL23AP63-201ENST00000498752 471 ntBASIC1.86□□□□□ -2.11
SRP54P61011 AC008628.2-201ENST00000502605 298 ntBASIC1.86□□□□□ -2.11
SRP54P61011 RNA5SP490-201ENST00000517141 136 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms