Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.58□□□□□ -2.32
SPCS3P61009 MIR4742-201ENST00000581069 85 ntBASIC0.58□□□□□ -2.32
SPCS3P61009 AC008751.2-201ENST00000597885 980 ntBASIC0.58□□□□□ -2.32
SPCS3P61009 AC136475.10-201ENST00000620253 385 ntBASIC0.58□□□□□ -2.32
SPCS3P61009 AL157786.1-207ENST00000627771 695 ntBASIC0.58□□□□□ -2.32
SPCS3P61009 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SPCS3P61009 CYCSP33-201ENST00000414485 327 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 C1DP2-201ENST00000418167 426 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 CALM2P2-201ENST00000428512 440 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 AC002429.1-201ENST00000437672 148 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 MTND3P1-201ENST00000441336 220 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.57□□□□□ -2.32
SPCS3P61009 SNRPGP7-201ENST00000469016 106 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 MTND3P25-201ENST00000509243 135 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 RNU6-113P-201ENST00000516653 101 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 RNA5SP337-201ENST00000517007 109 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 AC090142.3-201ENST00000519012 385 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 SUMO2P16-201ENST00000519475 264 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.57□□□□□ -2.32
SPCS3P61009 MIR3973-201ENST00000579824 107 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.57□□□□□ -2.32
SPCS3P61009 AC008521.1-201ENST00000587471 187 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 RPL17P51-201ENST00000605218 238 ntBASIC0.57□□□□□ -2.32
SPCS3P61009 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.57□□□□□ -2.32
SPCS3P61009 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.57□□□□□ -2.32
SPCS3P61009 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.57□□□□□ -2.32
SPCS3P61009 Y_RNA.124-201ENST00000363339 93 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 Y_RNA.132-201ENST00000363421 102 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 RNU6-392P-201ENST00000364926 101 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 SNORA72.2-201ENST00000365028 127 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 RNU6-877P-201ENST00000383868 107 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 SNORA24.1-201ENST00000384401 135 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 RNU6-1026P-201ENST00000384465 108 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 MIR200A-201ENST00000384875 90 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 RNU6-293P-201ENST00000411259 106 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 RNU6-607P-201ENST00000411283 108 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 RNA5SP111-201ENST00000411386 101 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.56□□□□□ -2.32
SPCS3P61009 AC004941.2-201ENST00000427009 228 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 AC078809.1-201ENST00000427601 140 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.56□□□□□ -2.32
SPCS3P61009 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.56□□□□□ -2.32
SPCS3P61009 MTND1P18-201ENST00000448191 573 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.56□□□□□ -2.32
SPCS3P61009 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.56□□□□□ -2.32
SPCS3P61009 AC016550.1-201ENST00000505348 785 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 RBBP4P6-201ENST00000508098 202 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 AC067942.3-201ENST00000512025 362 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.56□□□□□ -2.32
SPCS3P61009 EIF4A1P12-201ENST00000551910 141 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.56□□□□□ -2.32
SPCS3P61009 AC022432.1-201ENST00000595739 310 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 AC073539.2-201ENST00000597113 165 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.56□□□□□ -2.32
SPCS3P61009 AC108706.1-201ENST00000611053 297 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 MIR338-201ENST00000636369 67 ntBASIC0.56□□□□□ -2.32
SPCS3P61009 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
SPCS3P61009 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SPCS3P61009 RNU6-692P-201ENST00000384496 107 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 SNORA26.3-201ENST00000391119 136 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 FGF7P8-201ENST00000402994 292 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 RNU6-1054P-201ENST00000411293 104 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.55□□□□□ -2.32
SPCS3P61009 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.55□□□□□ -2.32
SPCS3P61009 AL163973.1-201ENST00000484753 577 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 HMGN1P12-201ENST00000499125 195 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SPCS3P61009 RNU6-377P-201ENST00000515965 102 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.55□□□□□ -2.32
SPCS3P61009 AL590705.4-201ENST00000532209 134 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.55□□□□□ -2.32
SPCS3P61009 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.55□□□□□ -2.32
SPCS3P61009 BNIP3P16-201ENST00000589779 534 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 AC105148.1-201ENST00000604961 409 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 AC013244.3-201ENST00000605614 388 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
SPCS3P61009 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.55□□□□□ -2.32
SPCS3P61009 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SPCS3P61009 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
SPCS3P61009 SNORA18.2-201ENST00000383865 132 ntBASIC0.54□□□□□ -2.32
SPCS3P61009 RPS3AP1-201ENST00000413190 320 ntBASIC0.54□□□□□ -2.32
SPCS3P61009 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.54□□□□□ -2.32
SPCS3P61009 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.54□□□□□ -2.32
SPCS3P61009 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.54□□□□□ -2.32
SPCS3P61009 AC244505.5-201ENST00000443639 207 ntBASIC0.54□□□□□ -2.32
SPCS3P61009 AC048334.1-201ENST00000477975 159 ntBASIC0.54□□□□□ -2.32
SPCS3P61009 SNORD79.1-201ENST00000516069 84 ntBASIC0.54□□□□□ -2.32
SPCS3P61009 AC025423.5-201ENST00000550230 219 ntBASIC0.54□□□□□ -2.32
SPCS3P61009 AL121579.1-201ENST00000555129 305 ntBASIC0.54□□□□□ -2.32
SPCS3P61009 snoU13.31-201ENST00000607291 104 ntBASIC0.54□□□□□ -2.32
SPCS3P61009 U3.4-201ENST00000363352 213 ntBASIC0.53□□□□□ -2.32
SPCS3P61009 RNU6-378P-201ENST00000384324 107 ntBASIC0.53□□□□□ -2.32
SPCS3P61009 RNU6-39P-201ENST00000384344 107 ntBASIC0.53□□□□□ -2.32
SPCS3P61009 MIR605-201ENST00000385078 83 ntBASIC0.53□□□□□ -2.32
SPCS3P61009 RPS26P5-201ENST00000418544 335 ntBASIC0.53□□□□□ -2.32
SPCS3P61009 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.53□□□□□ -2.32
SPCS3P61009 AC137499.1-201ENST00000427602 88 ntBASIC0.53□□□□□ -2.32
SPCS3P61009 Z82205.1-201ENST00000428456 297 ntBASIC0.53□□□□□ -2.32
SPCS3P61009 AC000111.3-201ENST00000433478 193 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms