Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL590135.1-201ENST00000422215 156 ntBASIC1.4□□□□□ -2.19
VSX2P58304 AC019205.3-201ENST00000424573 156 ntBASIC1.4□□□□□ -2.19
VSX2P58304 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.4□□□□□ -2.19
VSX2P58304 MTND4P32-201ENST00000437189 1237 ntBASIC1.4□□□□□ -2.19
VSX2P58304 AC016700.2-201ENST00000446011 156 ntBASIC1.4□□□□□ -2.19
VSX2P58304 AC245102.2-201ENST00000448956 180 ntBASIC1.4□□□□□ -2.19
VSX2P58304 AC015911.1-201ENST00000495111 156 ntBASIC1.4□□□□□ -2.19
VSX2P58304 LRRC34P2-201ENST00000514850 553 ntBASIC1.4□□□□□ -2.19
VSX2P58304 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
VSX2P58304 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.4□□□□□ -2.19
VSX2P58304 AC087441.2-201ENST00000529141 262 ntBASIC1.4□□□□□ -2.19
VSX2P58304 AP002963.1-201ENST00000530590 184 ntBASIC1.4□□□□□ -2.19
VSX2P58304 SUB1P2-201ENST00000556401 297 ntBASIC1.4□□□□□ -2.19
VSX2P58304 MIR4528-201ENST00000577763 90 ntBASIC1.4□□□□□ -2.19
VSX2P58304 MIR4781-201ENST00000585250 76 ntBASIC1.4□□□□□ -2.19
VSX2P58304 AL359821.1-201ENST00000605519 182 ntBASIC1.4□□□□□ -2.19
VSX2P58304 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.4□□□□□ -2.19
VSX2P58304 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
VSX2P58304 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.4□□□□□ -2.19
VSX2P58304 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.4□□□□□ -2.19
VSX2P58304 AL450472.1-202ENST00000637286 180 ntBASIC1.4□□□□□ -2.19
VSX2P58304 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VSX2P58304 Y_RNA.99-201ENST00000363138 105 ntBASIC1.39□□□□□ -2.19
VSX2P58304 Y_RNA.381-201ENST00000365666 102 ntBASIC1.39□□□□□ -2.19
VSX2P58304 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VSX2P58304 RNU6-434P-201ENST00000384376 107 ntBASIC1.39□□□□□ -2.19
VSX2P58304 SNORA12.2-201ENST00000391040 156 ntBASIC1.39□□□□□ -2.19
VSX2P58304 RPS29P13-201ENST00000402041 169 ntBASIC1.39□□□□□ -2.19
VSX2P58304 AL117339.3-201ENST00000418733 162 ntBASIC1.39□□□□□ -2.19
VSX2P58304 EIF4EP2-201ENST00000422816 654 ntBASIC1.39□□□□□ -2.19
VSX2P58304 AC244670.1-201ENST00000436879 112 ntBASIC1.39□□□□□ -2.19
VSX2P58304 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.39□□□□□ -2.19
VSX2P58304 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.39□□□□□ -2.19
VSX2P58304 AC092473.1-201ENST00000441098 221 ntBASIC1.39□□□□□ -2.19
VSX2P58304 AL031274.1-201ENST00000450334 232 ntBASIC1.39□□□□□ -2.19
VSX2P58304 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.39□□□□□ -2.19
VSX2P58304 ATP5EP1-201ENST00000510257 156 ntBASIC1.39□□□□□ -2.19
VSX2P58304 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.39□□□□□ -2.19
VSX2P58304 MTCO3P23-201ENST00000561363 289 ntBASIC1.39□□□□□ -2.19
VSX2P58304 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.39□□□□□ -2.19
VSX2P58304 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.39□□□□□ -2.19
VSX2P58304 MIR4713-201ENST00000582691 75 ntBASIC1.39□□□□□ -2.19
VSX2P58304 AC078795.3-201ENST00000602913 472 ntBASIC1.39□□□□□ -2.19
VSX2P58304 AC012507.3-201ENST00000603556 477 ntBASIC1.39□□□□□ -2.19
VSX2P58304 AC063944.3-201ENST00000609969 533 ntBASIC1.39□□□□□ -2.19
VSX2P58304 AL390237.1-201ENST00000404226 1415 ntBASIC1.39□□□□□ -2.19
VSX2P58304 RNU6-266P-201ENST00000364225 107 ntBASIC1.38□□□□□ -2.19
VSX2P58304 RNU6-142P-201ENST00000384019 107 ntBASIC1.38□□□□□ -2.19
VSX2P58304 RNU6-439P-201ENST00000384188 106 ntBASIC1.38□□□□□ -2.19
VSX2P58304 SNORA36A-201ENST00000384221 132 ntBASIC1.38□□□□□ -2.19
VSX2P58304 RNU6-1245P-201ENST00000411130 106 ntBASIC1.38□□□□□ -2.19
VSX2P58304 RN7SKP142-201ENST00000411236 328 ntBASIC1.38□□□□□ -2.19
VSX2P58304 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.38□□□□□ -2.19
VSX2P58304 AC009310.1-201ENST00000414414 451 ntBASIC1.38□□□□□ -2.19
VSX2P58304 MTCYBP8-201ENST00000422855 651 ntBASIC1.38□□□□□ -2.19
VSX2P58304 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.38□□□□□ -2.19
VSX2P58304 CETN4P-201ENST00000432407 469 ntBASIC1.38□□□□□ -2.19
VSX2P58304 SNRPGP13-201ENST00000442212 177 ntBASIC1.38□□□□□ -2.19
VSX2P58304 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.38□□□□□ -2.19
VSX2P58304 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.38□□□□□ -2.19
VSX2P58304 FO393415.2-201ENST00000480085 343 ntBASIC1.38□□□□□ -2.19
VSX2P58304 AC010409.1-201ENST00000487382 476 ntBASIC1.38□□□□□ -2.19
VSX2P58304 AC022447.4-201ENST00000504053 364 ntBASIC1.38□□□□□ -2.19
VSX2P58304 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.38□□□□□ -2.19
VSX2P58304 TRMT112P2-201ENST00000512910 132 ntBASIC1.38□□□□□ -2.19
VSX2P58304 RNU6-430P-201ENST00000517078 107 ntBASIC1.38□□□□□ -2.19
VSX2P58304 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.38□□□□□ -2.19
VSX2P58304 AC115990.1-201ENST00000526957 301 ntBASIC1.38□□□□□ -2.19
VSX2P58304 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.38□□□□□ -2.19
VSX2P58304 HSPE1P4-201ENST00000550617 308 ntBASIC1.38□□□□□ -2.19
VSX2P58304 AC109446.1-201ENST00000566172 220 ntBASIC1.38□□□□□ -2.19
VSX2P58304 BNIP3P16-201ENST00000589779 534 ntBASIC1.38□□□□□ -2.19
VSX2P58304 AC091805.2-201ENST00000603848 235 ntBASIC1.38□□□□□ -2.19
VSX2P58304 AC010900.2-201ENST00000604508 210 ntBASIC1.38□□□□□ -2.19
VSX2P58304 ZNF209P-201ENST00000593450 2304 ntBASIC1.38□□□□□ -2.19
VSX2P58304 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
VSX2P58304 MIR337-201ENST00000362281 93 ntBASIC1.37□□□□□ -2.19
VSX2P58304 RNU6-23P-201ENST00000363283 107 ntBASIC1.37□□□□□ -2.19
VSX2P58304 RNU6-1141P-201ENST00000364520 107 ntBASIC1.37□□□□□ -2.19
VSX2P58304 Y_RNA.332-201ENST00000365271 113 ntBASIC1.37□□□□□ -2.19
VSX2P58304 RNU6-26P-201ENST00000383985 107 ntBASIC1.37□□□□□ -2.19
VSX2P58304 MIR320A-201ENST00000385302 82 ntBASIC1.37□□□□□ -2.19
VSX2P58304 SNORA48.1-201ENST00000390879 135 ntBASIC1.37□□□□□ -2.19
VSX2P58304 RNU2-41P-201ENST00000410991 178 ntBASIC1.37□□□□□ -2.19
VSX2P58304 RNA5SP247-201ENST00000411181 105 ntBASIC1.37□□□□□ -2.19
VSX2P58304 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VSX2P58304 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.37□□□□□ -2.19
VSX2P58304 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.37□□□□□ -2.19
VSX2P58304 AL590556.1-201ENST00000423231 483 ntBASIC1.37□□□□□ -2.19
VSX2P58304 SNAP23P1-201ENST00000433229 246 ntBASIC1.37□□□□□ -2.19
VSX2P58304 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.37□□□□□ -2.19
VSX2P58304 AC009474.2-201ENST00000451383 136 ntBASIC1.37□□□□□ -2.19
VSX2P58304 RNU6-333P-201ENST00000459117 107 ntBASIC1.37□□□□□ -2.19
VSX2P58304 BET1P1-201ENST00000482276 359 ntBASIC1.37□□□□□ -2.19
VSX2P58304 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.37□□□□□ -2.19
VSX2P58304 AC005840.1-201ENST00000498412 377 ntBASIC1.37□□□□□ -2.19
VSX2P58304 AC021146.2-201ENST00000504736 556 ntBASIC1.37□□□□□ -2.19
VSX2P58304 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.37□□□□□ -2.19
VSX2P58304 RNA5SP490-201ENST00000517141 136 ntBASIC1.37□□□□□ -2.19
VSX2P58304 AC109479.2-201ENST00000517842 174 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms