Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SNORD116-29-201ENST00000384516 83 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 MIR627-201ENST00000384979 97 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 MIR218-1-201ENST00000384999 110 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 RNY4P36-201ENST00000391116 96 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 SNORA26.3-201ENST00000391119 136 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 CBX3P9-201ENST00000402326 552 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN20P56880 GPM6BP3-201ENST00000442797 145 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 AC079354.2-201ENST00000453523 154 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN20P56880 Y_RNA.653-201ENST00000459091 95 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 AC080013.2-201ENST00000460866 323 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 RPL23AP70-201ENST00000483361 460 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN20P56880 AC023141.11-201ENST00000508864 202 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 Y_RNA.718-201ENST00000517110 102 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.4□□□□□ -2.03
CLDN20P56880 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.4□□□□□ -2.03
CLDN20P56880 AC021231.3-201ENST00000558497 370 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 MIR5571-201ENST00000577998 113 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.4□□□□□ -2.03
CLDN20P56880 AC105245.1-201ENST00000581934 244 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 AC005899.2-201ENST00000584353 90 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 AC006023.1-201ENST00000603944 259 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 AC069294.1-201ENST00000608397 350 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 AC009318.2-201ENST00000610917 651 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 MTND4LP32-201ENST00000636111 270 ntBASIC2.4□□□□□ -2.03
CLDN20P56880 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDN20P56880 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.39□□□□□ -2.03
CLDN20P56880 MTND4P29-201ENST00000503122 1372 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 RNU6-1286P-201ENST00000383871 107 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 Y_RNA.404-201ENST00000383978 102 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 RNU6-968P-201ENST00000384076 107 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 MIR196B-201ENST00000384852 84 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 RNU2-25P-201ENST00000411041 191 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.39□□□□□ -2.03
CLDN20P56880 AL513124.1-201ENST00000450410 614 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 SNORA59A-201ENST00000459326 152 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 FO393415.2-201ENST00000480085 343 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 HMGB1P35-201ENST00000503360 598 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 AC005741.1-201ENST00000511094 432 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDN20P56880 RNU6-1213P-201ENST00000517075 94 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 MIR5696-201ENST00000578474 85 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 MIR4635-201ENST00000583759 79 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 AC133104.2-201ENST00000615272 193 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 HMGB1P24-202ENST00000615653 685 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 AC126177.8-201ENST00000618339 1015 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 SNORD98-201ENST00000636377 67 ntBASIC2.39□□□□□ -2.03
CLDN20P56880 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.39□□□□□ -2.03
CLDN20P56880 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CLDN20P56880 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLDN20P56880 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CLDN20P56880 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CLDN20P56880 RNU4-56P-201ENST00000364700 142 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 RNU6-310P-201ENST00000384655 107 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 Y_RNA.646-201ENST00000410980 101 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 RNU6-1304P-201ENST00000411374 106 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN20P56880 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 AL590135.1-201ENST00000422215 156 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 AC019205.3-201ENST00000424573 156 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN20P56880 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN20P56880 AC016700.2-201ENST00000446011 156 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 ELOCP24-201ENST00000456370 334 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 RNU7-152P-201ENST00000458982 64 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 AC073901.1-201ENST00000462471 408 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 AC015911.1-201ENST00000495111 156 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN20P56880 AC097473.1-201ENST00000508142 408 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 RPL30P11-203ENST00000598995 310 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 AL356280.1-201ENST00000603614 379 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 AL137847.3-201ENST00000611521 109 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 AL450472.1-202ENST00000637286 180 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CLDN20P56880 AC233981.2-201ENST00000611524 1614 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 ZNF299P-201ENST00000406845 1804 ntBASIC2.38□□□□□ -2.03
CLDN20P56880 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN20P56880 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN20P56880 RNU1-72P-201ENST00000362976 153 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 SNORA29-201ENST00000384183 140 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 Y_RNA.533-201ENST00000384596 114 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 Y_RNA.535-201ENST00000384612 99 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN20P56880 AC243428.1-201ENST00000421099 264 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 MTND4P28-201ENST00000426217 387 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 RPS3P1-201ENST00000456781 192 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 RPL30P15-201ENST00000457129 321 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN20P56880 SRIP1-201ENST00000489235 288 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 AC140059.1-201ENST00000489238 361 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN20P56880 AC096725.1-201ENST00000514266 313 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 RNA5SP384-201ENST00000516615 116 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 RNU6-567P-201ENST00000516746 107 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 SNORA31.16-201ENST00000516773 139 ntBASIC2.37□□□□□ -2.03
CLDN20P56880 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms