Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SUMO3P55854 U3.9-201ENST00000363823 204 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 Y_RNA.216-201ENST00000364205 93 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 RNU4-42P-201ENST00000364738 142 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 AC117470.1-201ENST00000381974 330 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 Y_RNA.605-201ENST00000410577 105 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.87□□□□□ -1.95
SUMO3P55854 AC104332.2-201ENST00000429959 156 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.87□□□□□ -1.95
SUMO3P55854 RPL7P49-201ENST00000471402 708 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 RNU4-77P-201ENST00000516692 156 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 RNU6-58P-201ENST00000517143 103 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 SNORA31.26-201ENST00000517250 137 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 AC091144.1-201ENST00000519573 138 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 GNAI2P1-201ENST00000541815 315 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 AC027288.2-201ENST00000553028 243 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.87□□□□□ -1.95
SUMO3P55854 MIR5004-201ENST00000579078 107 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.87□□□□□ -1.95
SUMO3P55854 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.87□□□□□ -1.95
SUMO3P55854 AL356575.1-201ENST00000603008 283 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.87□□□□□ -1.95
SUMO3P55854 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.87□□□□□ -1.95
SUMO3P55854 MIR7112-201ENST00000616126 65 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 AC007485.1-201ENST00000616755 206 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 AL138825.1-201ENST00000618587 192 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 AC138305.3-201ENST00000624988 240 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 AL606534.2-204ENST00000635008 178 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 AC099654.10-201ENST00000640395 161 ntBASIC2.87□□□□□ -1.95
SUMO3P55854 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SUMO3P55854 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.87□□□□□ -1.95
SUMO3P55854 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SUMO3P55854 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.87□□□□□ -1.95
SUMO3P55854 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SUMO3P55854 Y_RNA.148-201ENST00000363557 117 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 Y_RNA.319-201ENST00000365138 92 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 SNORA33.2-201ENST00000365413 134 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 Y_RNA.422-201ENST00000384054 114 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 RNU6-220P-201ENST00000390919 107 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 Y_RNA.592-201ENST00000410274 109 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.86□□□□□ -1.95
SUMO3P55854 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.86□□□□□ -1.95
SUMO3P55854 CYP2C59P-201ENST00000457790 269 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 RNU7-87P-201ENST00000459343 62 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 AC090515.1-201ENST00000465295 476 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.86□□□□□ -1.95
SUMO3P55854 RNU6-475P-201ENST00000516073 104 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 RNU6-911P-201ENST00000516523 104 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 MIR2355-201ENST00000517199 87 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 RNU6-586P-201ENST00000517265 104 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SUMO3P55854 ANP32BP3-201ENST00000559213 706 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 AC090617.3-201ENST00000573670 475 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 AC008121.3-201ENST00000618726 433 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 AC090517.3-201ENST00000625170 141 ntBASIC2.86□□□□□ -1.95
SUMO3P55854 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.86□□□□□ -1.95
SUMO3P55854 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SUMO3P55854 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SUMO3P55854 RNU6-1180P-201ENST00000364935 107 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 Y_RNA.358-201ENST00000365491 99 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SUMO3P55854 SNORD15B-201ENST00000384714 146 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 MIR95-201ENST00000385072 81 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 SNORA46.1-201ENST00000391069 153 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 RNA5SP293-201ENST00000410527 113 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.85□□□□□ -1.95
SUMO3P55854 AC114482.1-201ENST00000418010 247 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 AL445687.1-201ENST00000439946 251 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.85□□□□□ -1.95
SUMO3P55854 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.85□□□□□ -1.95
SUMO3P55854 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.85□□□□□ -1.95
SUMO3P55854 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.85□□□□□ -1.95
SUMO3P55854 VN1R91P-201ENST00000594377 169 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.85□□□□□ -1.95
SUMO3P55854 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.85□□□□□ -1.95
SUMO3P55854 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.85□□□□□ -1.95
SUMO3P55854 AC016925.2-201ENST00000605108 242 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 AL449363.1-201ENST00000617815 186 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 AC018692.3-201ENST00000623929 123 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 MIR4272-201ENST00000635924 64 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 MTND5P16-201ENST00000460269 1703 ntBASIC2.85□□□□□ -1.95
SUMO3P55854 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
SUMO3P55854 BX322639.1-202ENST00000423987 2213 ntBASIC2.84□□□□□ -1.95
SUMO3P55854 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.84□□□□□ -1.95
SUMO3P55854 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.84□□□□□ -1.95
SUMO3P55854 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SUMO3P55854 SNORA38.1-201ENST00000364172 131 ntBASIC2.84□□□□□ -1.95
SUMO3P55854 RNA5SP240-201ENST00000365355 128 ntBASIC2.84□□□□□ -1.95
SUMO3P55854 Y_RNA.557-201ENST00000384680 107 ntBASIC2.84□□□□□ -1.95
SUMO3P55854 RNU6-159P-201ENST00000391080 106 ntBASIC2.84□□□□□ -1.95
SUMO3P55854 RNU1-139P-201ENST00000391307 165 ntBASIC2.84□□□□□ -1.95
SUMO3P55854 FO393413.1-201ENST00000402892 195 ntBASIC2.84□□□□□ -1.95
SUMO3P55854 USP9YP16-201ENST00000430287 407 ntBASIC2.84□□□□□ -1.95
SUMO3P55854 AC092427.1-202ENST00000430569 476 ntBASIC2.84□□□□□ -1.95
SUMO3P55854 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.84□□□□□ -1.95
SUMO3P55854 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.84□□□□□ -1.95
SUMO3P55854 AL161788.1-201ENST00000441805 169 ntBASIC2.84□□□□□ -1.95
SUMO3P55854 USP9YP23-201ENST00000455085 407 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms