Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.41□□□□□ -2.18
CDH6P55285 PRPS1P1-201ENST00000445305 876 ntBASIC1.41□□□□□ -2.18
CDH6P55285 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.41□□□□□ -2.18
CDH6P55285 AL031274.1-201ENST00000450334 232 ntBASIC1.41□□□□□ -2.18
CDH6P55285 AC013470.1-201ENST00000453438 462 ntBASIC1.41□□□□□ -2.18
CDH6P55285 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
CDH6P55285 snoU13.9-201ENST00000458927 103 ntBASIC1.41□□□□□ -2.18
CDH6P55285 AC005908.1-201ENST00000468701 347 ntBASIC1.41□□□□□ -2.18
CDH6P55285 AC079140.5-201ENST00000507882 310 ntBASIC1.41□□□□□ -2.18
CDH6P55285 LRRC34P2-201ENST00000514850 553 ntBASIC1.41□□□□□ -2.18
CDH6P55285 SNORA31.16-201ENST00000516773 139 ntBASIC1.41□□□□□ -2.18
CDH6P55285 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.41□□□□□ -2.18
CDH6P55285 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.41□□□□□ -2.18
CDH6P55285 AC012414.6-201ENST00000568241 401 ntBASIC1.41□□□□□ -2.18
CDH6P55285 PRR13P7-201ENST00000605538 430 ntBASIC1.41□□□□□ -2.18
CDH6P55285 AC091931.1-201ENST00000623488 728 ntBASIC1.41□□□□□ -2.18
CDH6P55285 AC022418.1-201ENST00000624118 445 ntBASIC1.41□□□□□ -2.18
CDH6P55285 MTND5P9-201ENST00000503854 1755 ntBASIC1.41□□□□□ -2.18
CDH6P55285 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CDH6P55285 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CDH6P55285 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CDH6P55285 Y_RNA.67-201ENST00000362870 100 ntBASIC1.4□□□□□ -2.19
CDH6P55285 RNU6-112P-201ENST00000363599 104 ntBASIC1.4□□□□□ -2.19
CDH6P55285 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.4□□□□□ -2.19
CDH6P55285 RNU6-203P-201ENST00000384038 104 ntBASIC1.4□□□□□ -2.19
CDH6P55285 RNU5A-2P-201ENST00000384337 116 ntBASIC1.4□□□□□ -2.19
CDH6P55285 SNORD70.1-201ENST00000391007 85 ntBASIC1.4□□□□□ -2.19
CDH6P55285 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
CDH6P55285 RNU6-248P-201ENST00000410720 107 ntBASIC1.4□□□□□ -2.19
CDH6P55285 AC133104.1-201ENST00000429100 218 ntBASIC1.4□□□□□ -2.19
CDH6P55285 AL445567.1-201ENST00000439121 144 ntBASIC1.4□□□□□ -2.19
CDH6P55285 MTND1P18-201ENST00000448191 573 ntBASIC1.4□□□□□ -2.19
CDH6P55285 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH6P55285 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CDH6P55285 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH6P55285 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH6P55285 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH6P55285 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.4□□□□□ -2.19
CDH6P55285 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
CDH6P55285 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.4□□□□□ -2.19
CDH6P55285 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.4□□□□□ -2.19
CDH6P55285 AC109446.1-201ENST00000566172 220 ntBASIC1.4□□□□□ -2.19
CDH6P55285 MIR3923-201ENST00000579521 83 ntBASIC1.4□□□□□ -2.19
CDH6P55285 AC091805.2-201ENST00000603848 235 ntBASIC1.4□□□□□ -2.19
CDH6P55285 AC002044.1-201ENST00000606707 158 ntBASIC1.4□□□□□ -2.19
CDH6P55285 AL603755.1-201ENST00000619504 163 ntBASIC1.4□□□□□ -2.19
CDH6P55285 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.4□□□□□ -2.19
CDH6P55285 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.4□□□□□ -2.19
CDH6P55285 AC245060.5-201ENST00000610778 3293 ntBASIC1.4□□□□□ -2.19
CDH6P55285 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.4□□□□□ -2.19
CDH6P55285 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.4□□□□□ -2.19
CDH6P55285 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CDH6P55285 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
CDH6P55285 AC092268.1-201ENST00000342691 405 ntBASIC1.39□□□□□ -2.19
CDH6P55285 RNU6-414P-201ENST00000363705 104 ntBASIC1.39□□□□□ -2.19
CDH6P55285 Y_RNA.169-201ENST00000363745 96 ntBASIC1.39□□□□□ -2.19
CDH6P55285 RNU6-438P-201ENST00000365561 103 ntBASIC1.39□□□□□ -2.19
CDH6P55285 SNORA16.2-201ENST00000390991 127 ntBASIC1.39□□□□□ -2.19
CDH6P55285 RNU1-78P-201ENST00000391248 165 ntBASIC1.39□□□□□ -2.19
CDH6P55285 RPS29P13-201ENST00000402041 169 ntBASIC1.39□□□□□ -2.19
CDH6P55285 RNU4-62P-201ENST00000410125 130 ntBASIC1.39□□□□□ -2.19
CDH6P55285 RNU2-9P-201ENST00000410194 145 ntBASIC1.39□□□□□ -2.19
CDH6P55285 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.39□□□□□ -2.19
CDH6P55285 AC108667.1-201ENST00000428618 249 ntBASIC1.39□□□□□ -2.19
CDH6P55285 HSPE1P24-201ENST00000450782 238 ntBASIC1.39□□□□□ -2.19
CDH6P55285 RN7SKP210-201ENST00000459176 261 ntBASIC1.39□□□□□ -2.19
CDH6P55285 RNU2-69P-201ENST00000516061 100 ntBASIC1.39□□□□□ -2.19
CDH6P55285 SUMO2P18-201ENST00000518873 252 ntBASIC1.39□□□□□ -2.19
CDH6P55285 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.39□□□□□ -2.19
CDH6P55285 HSPE1P4-201ENST00000550617 308 ntBASIC1.39□□□□□ -2.19
CDH6P55285 DNAJC19P9-201ENST00000555084 351 ntBASIC1.39□□□□□ -2.19
CDH6P55285 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.39□□□□□ -2.19
CDH6P55285 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.39□□□□□ -2.19
CDH6P55285 MIR5094-201ENST00000578766 85 ntBASIC1.39□□□□□ -2.19
CDH6P55285 AC012507.3-201ENST00000603556 477 ntBASIC1.39□□□□□ -2.19
CDH6P55285 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
CDH6P55285 RNU6-181P-201ENST00000363225 107 ntBASIC1.38□□□□□ -2.19
CDH6P55285 U3.9-201ENST00000363823 204 ntBASIC1.38□□□□□ -2.19
CDH6P55285 RNU6-434P-201ENST00000384376 107 ntBASIC1.38□□□□□ -2.19
CDH6P55285 RNU6-1127P-201ENST00000384580 107 ntBASIC1.38□□□□□ -2.19
CDH6P55285 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
CDH6P55285 RNA5SP201-201ENST00000410316 124 ntBASIC1.38□□□□□ -2.19
CDH6P55285 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH6P55285 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH6P55285 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CDH6P55285 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH6P55285 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH6P55285 RPL31P3-201ENST00000458430 332 ntBASIC1.38□□□□□ -2.19
CDH6P55285 RNU1-123P-201ENST00000458950 160 ntBASIC1.38□□□□□ -2.19
CDH6P55285 AC079382.1-201ENST00000493346 557 ntBASIC1.38□□□□□ -2.19
CDH6P55285 MTCYBP18-201ENST00000501056 747 ntBASIC1.38□□□□□ -2.19
CDH6P55285 HMGN1P13-201ENST00000505795 138 ntBASIC1.38□□□□□ -2.19
CDH6P55285 AC097473.1-201ENST00000508142 408 ntBASIC1.38□□□□□ -2.19
CDH6P55285 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH6P55285 RNU6-445P-201ENST00000516949 107 ntBASIC1.38□□□□□ -2.19
CDH6P55285 AP005597.4-201ENST00000526762 229 ntBASIC1.38□□□□□ -2.19
CDH6P55285 AP003033.1-201ENST00000527244 415 ntBASIC1.38□□□□□ -2.19
CDH6P55285 AP002963.1-201ENST00000530590 184 ntBASIC1.38□□□□□ -2.19
CDH6P55285 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH6P55285 MIR3913-1-201ENST00000577744 102 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms