Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.29□□□□□ -2.04
LIMK1P53667 AC009314.1-201ENST00000603871 304 ntBASIC2.29□□□□□ -2.04
LIMK1P53667 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LIMK1P53667 AL159153.1-201ENST00000619688 317 ntBASIC2.29□□□□□ -2.04
LIMK1P53667 AL162373.1-201ENST00000620433 407 ntBASIC2.29□□□□□ -2.04
LIMK1P53667 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LIMK1P53667 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
LIMK1P53667 AC009487.4-201ENST00000624969 3585 ntBASIC2.29□□□□□ -2.04
LIMK1P53667 ZNF355P-201ENST00000427301 3216 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
LIMK1P53667 Y_RNA.89-201ENST00000363031 102 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 RNU6-1252P-201ENST00000363054 104 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 RNU4-56P-201ENST00000364700 142 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 MIR29B2-201ENST00000385055 81 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 SNORA46.1-201ENST00000391069 153 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 RNU6-192P-201ENST00000391253 100 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 HMGB3P2-201ENST00000411913 584 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 FCF1P9-201ENST00000412546 282 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 USP9YP18-201ENST00000425912 695 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LIMK1P53667 AL353752.1-201ENST00000454946 260 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 AP005597.4-201ENST00000526762 229 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.28□□□□□ -2.04
LIMK1P53667 AC064836.2-201ENST00000609491 462 ntBASIC2.28□□□□□ -2.04
LIMK1P53667 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LIMK1P53667 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LIMK1P53667 RNU6-1329P-201ENST00000365664 107 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 Y_RNA.504-201ENST00000384481 104 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 Y_RNA.508-201ENST00000384502 114 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 RNU6-1274P-201ENST00000384557 107 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 MIR95-201ENST00000385072 81 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 SNORA40.19-201ENST00000390846 128 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 BTF3L4P2-201ENST00000392798 346 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 AL591034.2-201ENST00000402839 359 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 SNRPEP10-201ENST00000420249 274 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 AL590135.1-201ENST00000422215 156 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.27□□□□□ -2.05
LIMK1P53667 AC019205.3-201ENST00000424573 156 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 NDUFA5P4-201ENST00000436704 385 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.27□□□□□ -2.05
LIMK1P53667 AC016700.2-201ENST00000446011 156 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.27□□□□□ -2.05
LIMK1P53667 AC007547.1-201ENST00000462177 490 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 RPL9P9-202ENST00000466501 579 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 AC015911.1-201ENST00000495111 156 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.27□□□□□ -2.05
LIMK1P53667 RPL39P5-202ENST00000512505 151 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 SNORA48.11-201ENST00000517015 89 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.27□□□□□ -2.05
LIMK1P53667 AC087241.2-201ENST00000535801 324 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 AC026371.1-201ENST00000551867 419 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 PRELID2P1-201ENST00000552837 301 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 MIR4781-201ENST00000585250 76 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 AL356157.2-201ENST00000605122 111 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 SNORD98-201ENST00000636377 67 ntBASIC2.27□□□□□ -2.05
LIMK1P53667 AC009541.1-201ENST00000438279 2662 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LIMK1P53667 RNU1-23P-201ENST00000363361 144 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 RNU6-1285P-201ENST00000363480 105 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 SNORD113-7-201ENST00000363762 77 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 RNU6-522P-201ENST00000364497 107 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 Y_RNA.256-201ENST00000364594 104 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 RNU6-546P-201ENST00000383991 107 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 RNU6-933P-201ENST00000384424 107 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 AL512604.1-201ENST00000404812 257 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 Y_RNA.597-201ENST00000410463 100 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 RNU2-32P-201ENST00000411193 191 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 UBE2V1P8-201ENST00000437166 265 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 AL031659.1-201ENST00000447075 539 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.26□□□□□ -2.05
LIMK1P53667 U8.21-201ENST00000459536 136 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.26□□□□□ -2.05
LIMK1P53667 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.26□□□□□ -2.05
LIMK1P53667 AC092436.3-201ENST00000511788 257 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 SNORA4.4-201ENST00000515921 135 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 RNU6-612P-201ENST00000516909 102 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.26□□□□□ -2.05
LIMK1P53667 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.26□□□□□ -2.05
LIMK1P53667 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.26□□□□□ -2.05
LIMK1P53667 MIR3136-201ENST00000583498 78 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 BNIP3P25-201ENST00000596023 559 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.26□□□□□ -2.05
LIMK1P53667 AP001836.1-201ENST00000604675 523 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 ELOCP5-201ENST00000604924 333 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 MIR3688-2-201ENST00000636963 87 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 MIR3662-201ENST00000637030 95 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 AC100810.6-201ENST00000638068 285 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.26□□□□□ -2.05
LIMK1P53667 AC121333.1-201ENST00000567488 2709 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 ZNF720P1-201ENST00000562403 1939 ntBASIC2.26□□□□□ -2.05
LIMK1P53667 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.26□□□□□ -2.05
LIMK1P53667 MIR21-201ENST00000362134 72 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 RNU6-254P-201ENST00000363377 107 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 Y_RNA.796-201ENST00000364268 102 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 Y_RNA.269-201ENST00000364685 89 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 Y_RNA.799-201ENST00000364992 102 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 SNORA25B-201ENST00000365507 128 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LIMK1P53667 SNORA41-201ENST00000384675 132 ntBASIC2.25□□□□□ -2.05
LIMK1P53667 RN7SKP32-201ENST00000410167 303 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms